AT3G13120


Description : Ribosomal protein S10p/S20e family protein


Gene families : OG_01_0005922 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005922_tree ,
OG_02_0005800 (LandPlants) Phylogenetic Tree(s): OG_02_0005800_tree ,
OG_03_0008353 (SeedPlants) Phylogenetic Tree(s): OG_03_0008353_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G13120
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00072750 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Cre03.g195650 No alias Protein biosynthesis.organelle translation... 0.22 Archaeplastida
GSVIVT01014640001 No alias Protein biosynthesis.organelle translation... 0.19 Archaeplastida
Gb_11573 No alias component psRPS10 of small ribosomal subunit proteome 0.14 Archaeplastida
LOC_Os03g10060.1 No alias component psRPS10 of small ribosomal subunit proteome 0.28 Archaeplastida
MA_10432148g0010 No alias component psRPS10 of small ribosomal subunit proteome 0.1 Archaeplastida
Mp7g14220.1 No alias component psRPS10 of small ribosomal subunit proteome 0.34 Archaeplastida
Pp3c20_8830V3.1 No alias Ribosomal protein S10p/S20e family protein 0.18 Archaeplastida
Pp3c24_19230V3.1 No alias Ribosomal protein S10p/S20e family protein 0.15 Archaeplastida
Pp3c8_18990V3.1 No alias Ribosomal protein S10p/S20e family protein 0.05 Archaeplastida
Smo118761 No alias Protein biosynthesis.organelle translation... 0.05 Archaeplastida
Solyc10g006030.3.1 No alias component psRPS10 of small ribosomal subunit proteome 0.26 Archaeplastida
Zm00001e000789_P001 No alias component psRPS10 of small ribosomal subunit proteome 0.27 Archaeplastida
Zm00001e038796_P002 No alias no hits & (original description: none) 0.2 Archaeplastida
AMTR_s00028p00072750 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 LandPlants
GSVIVT01014640001 No alias Protein biosynthesis.organelle translation... 0.19 LandPlants
Gb_11573 No alias component psRPS10 of small ribosomal subunit proteome 0.14 LandPlants
LOC_Os03g10060.1 No alias component psRPS10 of small ribosomal subunit proteome 0.27 LandPlants
MA_10432148g0010 No alias component psRPS10 of small ribosomal subunit proteome 0.1 LandPlants
Mp7g14220.1 No alias component psRPS10 of small ribosomal subunit proteome 0.33 LandPlants
Pp3c20_8830V3.1 No alias Ribosomal protein S10p/S20e family protein 0.18 LandPlants
Pp3c24_19230V3.1 No alias Ribosomal protein S10p/S20e family protein 0.15 LandPlants
Pp3c8_18990V3.1 No alias Ribosomal protein S10p/S20e family protein 0.05 LandPlants
Smo118761 No alias Protein biosynthesis.organelle translation... 0.05 LandPlants
Solyc10g006030.3.1 No alias component psRPS10 of small ribosomal subunit proteome 0.27 LandPlants
Zm00001e000789_P001 No alias component psRPS10 of small ribosomal subunit proteome 0.28 LandPlants
Zm00001e038796_P002 No alias no hits & (original description: none) 0.18 LandPlants
AMTR_s00028p00072750 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 SeedPlants
GSVIVT01014640001 No alias Protein biosynthesis.organelle translation... 0.2 SeedPlants
Gb_11573 No alias component psRPS10 of small ribosomal subunit proteome 0.13 SeedPlants
LOC_Os03g10060.1 No alias component psRPS10 of small ribosomal subunit proteome 0.26 SeedPlants
MA_10432148g0010 No alias component psRPS10 of small ribosomal subunit proteome 0.1 SeedPlants
Solyc10g006030.3.1 No alias component psRPS10 of small ribosomal subunit proteome 0.27 SeedPlants
Zm00001e000789_P001 No alias component psRPS10 of small ribosomal subunit proteome 0.26 SeedPlants
Zm00001e038796_P002 No alias no hits & (original description: none) 0.17 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Interproscan
BP GO:0006364 rRNA processing RCA Interproscan
BP GO:0006412 translation ISS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
BP GO:0009902 chloroplast relocation RCA Interproscan
BP GO:0010027 thylakoid membrane organization RCA Interproscan
CC GO:0015935 small ribosomal subunit ISS Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0015995 chlorophyll biosynthetic process RCA Interproscan
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Interproscan
BP GO:0034660 ncRNA metabolic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 96 190
No external refs found!