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  5. Zm00001e017430_P001

Zm00001e017430_P001


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e017430_P001
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00141060 evm_27.TU.AmTr_v1... External stimuli response.light.red/far red light.PIF... 0.03 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.02 Archaeplastida
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.03 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01028516001 No alias External stimuli response.light.red/far red light.PIF... 0.03 Archaeplastida
Gb_12264 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os07g05010.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 Archaeplastida
Mp3g17350.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c3_28970V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.03 LandPlants
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.03 LandPlants
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 LandPlants
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.03 LandPlants
GSVIVT01028516001 No alias External stimuli response.light.red/far red light.PIF... 0.03 LandPlants
LOC_Os07g05010.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 LandPlants
Mp3g17350.1 No alias transcription factor (bHLH) 0.02 LandPlants
Pp3c1_40040V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Pp3c3_28970V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.03 LandPlants
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.03 SeedPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 SeedPlants
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.02 SeedPlants
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.03 SeedPlants
GSVIVT01028238001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 SeedPlants
GSVIVT01028516001 No alias External stimuli response.light.red/far red light.PIF... 0.03 SeedPlants
LOC_Os07g05010.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 361 388
No external refs found!