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  5. AMTR_s00010p00235420

AMTR_s00010p00235420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.280

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG_01_0000097 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000097_tree ,
OG_02_0000048 (LandPlants) Phylogenetic Tree(s): OG_02_0000048_tree ,
OG_03_0000021 (SeedPlants) Phylogenetic Tree(s): OG_03_0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00235420
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00036130 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s01293p00010460 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
Gb_12368 No alias transcription factor (mTERF) 0.05 Archaeplastida
Gb_26175 No alias transcription factor (mTERF) 0.06 Archaeplastida
Gb_26176 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os06g12080.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_3151g0010 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Smo77318 No alias RNA biosynthesis.organelle... 0.07 Archaeplastida
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.05 Archaeplastida
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.02 Archaeplastida
AMTR_s00010p00225110 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 LandPlants
AMTR_s00126p00036130 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 LandPlants
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 LandPlants
AMTR_s01293p00010460 evm_27.TU.AmTr_v1... No description available 0.05 LandPlants
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.04 LandPlants
GSVIVT01028380001 No alias RNA biosynthesis.organelle... 0.03 LandPlants
Gb_12368 No alias transcription factor (mTERF) 0.04 LandPlants
Gb_24665 No alias transcription factor (mTERF) 0.02 LandPlants
Gb_26175 No alias transcription factor (mTERF) 0.05 LandPlants
Gb_26176 No alias transcription factor (mTERF) 0.03 LandPlants
Gb_26213 No alias transcription factor (mTERF) 0.03 LandPlants
LOC_Os06g12080.1 No alias transcription factor (mTERF) 0.02 LandPlants
MA_3151g0010 No alias transcription factor (mTERF) 0.03 LandPlants
MA_493420g0010 No alias transcription factor (mTERF) 0.04 LandPlants
MA_7539255g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_86824g0010 No alias transcription factor (mTERF) 0.02 LandPlants
MA_92135g0010 No alias transcription factor (mTERF) 0.02 LandPlants
Smo408106 No alias RNA biosynthesis.organelle... 0.02 LandPlants
Smo410501 No alias RNA biosynthesis.organelle... 0.02 LandPlants
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.03 LandPlants
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.03 LandPlants
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.05 LandPlants
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.04 LandPlants
Zm00001e010589_P001 No alias transcription factor (mTERF) 0.02 LandPlants
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.02 LandPlants
AMTR_s00010p00225110 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 SeedPlants
AMTR_s00010p00236880 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 SeedPlants
AMTR_s00126p00036130 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 SeedPlants
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 SeedPlants
AMTR_s01293p00010460 evm_27.TU.AmTr_v1... No description available 0.05 SeedPlants
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.04 SeedPlants
GSVIVT01028380001 No alias RNA biosynthesis.organelle... 0.03 SeedPlants
Gb_12368 No alias transcription factor (mTERF) 0.02 SeedPlants
Gb_24665 No alias transcription factor (mTERF) 0.02 SeedPlants
Gb_26175 No alias transcription factor (mTERF) 0.03 SeedPlants
Gb_26213 No alias transcription factor (mTERF) 0.03 SeedPlants
LOC_Os11g14130.1 No alias transcription factor (mTERF) 0.02 SeedPlants
MA_192398g0010 No alias transcription factor (mTERF) 0.02 SeedPlants
MA_3151g0010 No alias transcription factor (mTERF) 0.03 SeedPlants
MA_493420g0010 No alias transcription factor (mTERF) 0.04 SeedPlants
MA_7539255g0010 No alias no hits & (original description: none) 0.03 SeedPlants
MA_81581g0010 No alias transcription factor (mTERF) 0.02 SeedPlants
MA_86824g0010 No alias transcription factor (mTERF) 0.02 SeedPlants
MA_92135g0010 No alias transcription factor (mTERF) 0.02 SeedPlants
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.03 SeedPlants
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.05 SeedPlants
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.04 SeedPlants
Zm00001e010589_P001 No alias transcription factor (mTERF) 0.02 SeedPlants
Zm00001e022322_P001 No alias transcription factor (mTERF) 0.02 SeedPlants
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003690 MTERF 194 376
IPR003690 MTERF 103 300
No external refs found!