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  5. Zm00001e016398_P001

Zm00001e016398_P001


Description : ubiquitin E3 ligase (CERBERUS/LIN)


Gene families : OG_01_0001418 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001418_tree ,
OG_02_0001365 (LandPlants) Phylogenetic Tree(s): OG_02_0001365_tree ,
OG_03_0003337 (SeedPlants) Phylogenetic Tree(s): OG_03_0003337_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e016398_P001
Cluster HCCA: Cluster_537

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00231470 evm_27.TU.AmTr_v1... Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.02 Archaeplastida
Gb_32193 No alias Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus... 0.02 Archaeplastida
LOC_Os02g07190.1 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.03 Archaeplastida
MA_1171557g0010 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.05 Archaeplastida
MA_15009g0010 No alias Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus... 0.05 Archaeplastida
MA_7193588g0010 No alias No annotation 0.04 Archaeplastida
MA_7506947g0010 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.02 Archaeplastida
Solyc01g006380.2.1 No alias Putative E3 ubiquitin-protein ligase LIN OS=Medicago... 0.04 Archaeplastida
Solyc07g020870.3.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.05 Archaeplastida
Zm00001e013722_P001 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.02 Archaeplastida
Gb_32193 No alias Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus... 0.02 LandPlants
LOC_Os01g12930.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.02 LandPlants
LOC_Os02g07190.1 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.02 LandPlants
MA_1171557g0010 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.04 LandPlants
MA_15009g0010 No alias Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus... 0.04 LandPlants
MA_7193588g0010 No alias No annotation 0.03 LandPlants
MA_7506947g0010 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.02 LandPlants
Zm00001e013722_P001 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.02 LandPlants
Gb_32193 No alias Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus... 0.02 SeedPlants
MA_1171557g0010 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.02 SeedPlants
MA_15009g0010 No alias Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus... 0.02 SeedPlants
Solyc07g020870.3.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003613 Ubox_domain 230 301
IPR001680 WD40_repeat 928 957
No external refs found!