Zm00001e016366_P002


Description : transcription factor (ARF)


Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree ,
OG_02_0021180 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0020410 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e016366_P002
Cluster HCCA: Cluster_349

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00157690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
AT1G19850 MP, IAA24, ARF5 Transcriptional factor B3 family protein /... 0.03 Archaeplastida
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.03 Archaeplastida
GSVIVT01004942001 No alias RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
GSVIVT01011008001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01019566001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01021552001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01032251001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
LOC_Os02g06910.1 No alias transcription factor (ARF) 0.02 Archaeplastida
LOC_Os02g35140.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os04g43910.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os05g48870.1 No alias transcription factor (ARF) 0.02 Archaeplastida
LOC_Os10g33940.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os12g41950.1 No alias transcription factor (ARF) 0.03 Archaeplastida
MA_103763g0010 No alias Auxin response factor 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10432349g0010 No alias transcription factor (ARF) 0.02 Archaeplastida
MA_55076g0010 No alias transcription factor (ARF) 0.03 Archaeplastida
Mp1g07070.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Mp1g12750.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Mp2g02890.1 No alias Auxin response factor 19 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Pp3c14_16990V3.1 No alias auxin response factor 6 0.04 Archaeplastida
Solyc07g016180.3.1 No alias transcription factor (ARF) 0.03 Archaeplastida
Solyc07g042260.4.1 No alias transcription factor (ARF) 0.03 Archaeplastida
Solyc08g008380.4.1 No alias transcription factor (ARF) 0.05 Archaeplastida
Solyc08g082630.3.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e003229_P002 No alias transcription factor (ARF) 0.06 Archaeplastida
Zm00001e006577_P003 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e013639_P001 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e014833_P002 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e018126_P002 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e025163_P001 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e030290_P005 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e030325_P003 No alias transcription factor (ARF) 0.07 Archaeplastida
Zm00001e041910_P003 No alias transcription factor (ARF) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009725 response to hormone IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 119 219
IPR033389 AUX/IAA_dom 574 663
IPR010525 Auxin_resp 245 326
No external refs found!