Cre16.g651000


Description : 27.1.2 RNA.processing.RNA helicase RPA70D


Gene families : OG_01_0001582 (Gene family) Phylogenetic Tree(s): OG0001582_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre16.g651000
Cluster HCCA cluster: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT5G08020 RPA70B, ATRPA70B RPA70-kDa subunit B 0.05 Gene family
AT5G61000 RPA70D, ATRPA70D Replication factor-A protein 1-related 0.04 Gene family
GSVIVT01007849001 No alias 28.1 DNA.synthesis/chromatin structure Encodes a homolog... 0.06 Gene family
LOC_Os03g11540 Os03g0214100 28.1 DNA.synthesis/chromatin structure Encodes a homolog... 0.03 Gene family
MA_10327014g0020 No alias 28.1 DNA.synthesis/chromatin structure Encodes a homolog... 0.01 Gene family
MA_10328650g0010 No alias 28.1 DNA.synthesis/chromatin structure Encodes a homolog... 0.07 Gene family
MA_10331305g0010 No alias 28.1 DNA.synthesis/chromatin structure Encodes a homolog... 0.07 Gene family
MA_10342276g0010 No alias 28.1 DNA.synthesis/chromatin structure Encodes a homolog... 0.03 Gene family
MA_10356314g0020 No alias 28.1 DNA.synthesis/chromatin structure Encodes a homolog... 0.07 Gene family
MA_177350g0010 No alias 28.1 DNA.synthesis/chromatin structure Encodes a homolog... 0.03 Gene family
MA_181296g0010 No alias 28.1 DNA.synthesis/chromatin structure Encodes a homolog... 0.01 Gene family
Solyc03g115050.3.1 Solyc03g115050.3 28.1 DNA.synthesis/chromatin structure Encodes a homolog... 0.12 Gene family
Zm00001d028210 GRMZM2G098714 27.1.2 RNA.processing.RNA helicase RPA70D 0.09 Gene family
Zm00001d048086 GRMZM2G086934 27.1.2 RNA.processing.RNA helicase RPA70D 0.09 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006260 DNA replication IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR031657 REPA_OB_2 323 416
IPR007199 Rep_factor-A_N 7 99
IPR013955 Rep_factor-A_C 494 638
No external refs found!