Zm00001e015924_P003


Description : transcription factor (MADS/AGL)


Gene families : OG_01_0000011 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000011_tree ,
OG_02_0004419 (LandPlants) Phylogenetic Tree(s): OG_02_0004419_tree ,
OG_03_0002756 (SeedPlants) Phylogenetic Tree(s): OG_03_0002756_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e015924_P003
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00103080 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.05 Archaeplastida
AMTR_s00071p00198970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AT1G26310 AGL10, CAL1, CAL K-box region and MADS-box transcription factor family protein 0.04 Archaeplastida
AT2G03710 AGL3, SEP4 K-box region and MADS-box transcription factor family protein 0.06 Archaeplastida
AT2G14210 ANR1, AGL44 AGAMOUS-like 44 0.06 Archaeplastida
AT2G45660 SOC1, AGL20, ATSOC1 AGAMOUS-like 20 0.05 Archaeplastida
AT3G57390 AGL18 AGAMOUS-like 18 0.07 Archaeplastida
Cre11.g467577 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
GSVIVT01008140001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01018450001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01019883001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
Gb_30604 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_38920 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_38922 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_41550 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os02g52340.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os03g54160.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os06g11330.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os07g01820.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os09g02780.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os09g32948.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_6544g0010 No alias Floral homeotic protein AGAMOUS OS=Panax ginseng... 0.04 Archaeplastida
Solyc03g114840.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc06g059970.4.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc08g067230.4.1 No alias No annotation 0.03 Archaeplastida
Solyc10g017640.1.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e000846_P003 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e005708_P002 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e006950_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e010125_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e012024_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e018811_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e023236_P005 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e029170_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e031267_P003 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e034629_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e038716_P004 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e039774_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
LOC_Os02g52340.1 No alias transcription factor (MADS/AGL) 0.03 LandPlants
LOC_Os06g11330.1 No alias transcription factor (MADS/AGL) 0.03 LandPlants
LOC_Os06g11330.1 No alias transcription factor (MADS/AGL) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 98 176
No external refs found!