AT3G10010 (DML2)

Aliases : DML2

Description : demeter-like 2

Gene families : OG_01_0001102 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001102_tree ,
OG_02_0001721 (LandPlants) Phylogenetic Tree(s): OG_02_0001721_tree ,
OG_03_0001624 (SeedPlants) Phylogenetic Tree(s): OG_03_0001624_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G10010
Cluster	HCCA: Cluster_135

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01033777001	No alias	DNA damage response.DNA repair mechanisms.base excision...	0.04	Archaeplastida
LOC_Os02g29380.1	No alias	methylcytosine-specific DNA glycosylase (ROS1)	0.04	Archaeplastida
LOC_Os05g37350.1	No alias	methylcytosine-specific DNA glycosylase (ROS1)....	0.04	Archaeplastida
Zm00001e031766_P003	No alias	methylcytosine-specific DNA glycosylase (ROS1)....	0.04	Archaeplastida
GSVIVT01033777001	No alias	DNA damage response.DNA repair mechanisms.base excision...	0.03	LandPlants
Zm00001e031766_P003	No alias	methylcytosine-specific DNA glycosylase (ROS1)....	0.04	LandPlants
GSVIVT01033777001	No alias	DNA damage response.DNA repair mechanisms.base excision...	0.03	SeedPlants
Zm00001e031766_P003	No alias	methylcytosine-specific DNA glycosylase (ROS1)....	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006284	base-excision repair	ISS	Interproscan
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR028924	Perm-CXXC	1184	1216
IPR028925	RRM_DME	1219	1319

External Links

No external refs found!

AT3G10010 (DML2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation