Zm00001e015581_P001


Description : transcription factor (TUB)


Gene families : OG_01_0000335 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000335_tree ,
OG_02_0000295 (LandPlants) Phylogenetic Tree(s): OG_02_0000295_tree ,
OG_03_0000341 (SeedPlants) Phylogenetic Tree(s): OG_03_0000341_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e015581_P001
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT2G47900 AtTLP3, TLP3 tubby like protein 3 0.03 Archaeplastida
Cre12.g520650 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
GSVIVT01009728001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.04 Archaeplastida
GSVIVT01010999001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
Gb_21935 No alias transcription factor (TUB) 0.02 Archaeplastida
Gb_38151 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os02g47640.1 No alias transcription factor (TUB) 0.05 Archaeplastida
LOC_Os11g06420.1 No alias transcription factor (TUB) 0.02 Archaeplastida
Smo230435 No alias RNA biosynthesis.transcriptional activation.TUB... 0.04 Archaeplastida
Solyc04g071440.3.1 No alias transcription factor (TUB) 0.02 Archaeplastida
AT2G47900 AtTLP3, TLP3 tubby like protein 3 0.02 LandPlants
Gb_21935 No alias transcription factor (TUB) 0.02 LandPlants
Gb_36456 No alias transcription factor (TUB) 0.01 LandPlants
LOC_Os02g47640.1 No alias transcription factor (TUB) 0.03 LandPlants
LOC_Os11g06420.1 No alias transcription factor (TUB) 0.02 LandPlants
Smo230435 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 LandPlants
Solyc04g071440.3.1 No alias transcription factor (TUB) 0.02 LandPlants
AT2G47900 AtTLP3, TLP3 tubby like protein 3 0.02 SeedPlants
Gb_36456 No alias transcription factor (TUB) 0.01 SeedPlants
LOC_Os02g47640.1 No alias transcription factor (TUB) 0.03 SeedPlants
LOC_Os11g06420.1 No alias transcription factor (TUB) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000007 Tubby_C 139 432
IPR001810 F-box_dom 76 126
No external refs found!