Zm00001e015190_P001


Description : Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidopsis thaliana (sp|q9zu67|pp162_arath : 211.0)


Gene families : OG_01_0004280 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004280_tree ,
OG_02_0002954 (LandPlants) Phylogenetic Tree(s): OG_02_0002954_tree ,
OG_03_0000415 (SeedPlants) Phylogenetic Tree(s): OG_03_0000415_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e015190_P001
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00104950 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g36680,... 0.03 Archaeplastida
AMTR_s00029p00105510 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g36680,... 0.03 Archaeplastida
AT1G61870 PPR336 pentatricopeptide repeat 336 0.05 Archaeplastida
AT2G18520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
AT4G36680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 Archaeplastida
GSVIVT01018992001 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.03 Archaeplastida
LOC_Os01g58080.1 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.14 Archaeplastida
LOC_Os02g42210.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.13 Archaeplastida
Solyc02g062910.3.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.06 Archaeplastida
Solyc02g085650.4.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.03 Archaeplastida
Solyc10g005280.1.1 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.06 Archaeplastida
AMTR_s00029p00104950 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g36680,... 0.03 LandPlants
AMTR_s00029p00105510 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g36680,... 0.03 LandPlants
AT1G61870 PPR336 pentatricopeptide repeat 336 0.05 LandPlants
AT2G18520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 LandPlants
AT4G36680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 LandPlants
LOC_Os01g58080.1 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.14 LandPlants
LOC_Os02g42210.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.13 LandPlants
Solyc02g062910.3.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.06 LandPlants
Solyc02g085650.4.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.03 LandPlants
Solyc10g005280.1.1 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.06 LandPlants
AMTR_s00029p00105510 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g36680,... 0.03 SeedPlants
AMTR_s00032p00197250 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g55890,... 0.02 SeedPlants
AT1G55890 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 SeedPlants
AT1G61870 PPR336 pentatricopeptide repeat 336 0.03 SeedPlants
AT2G18520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 SeedPlants
AT3G13150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 SeedPlants
AT3G13160 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 SeedPlants
AT4G36680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 SeedPlants
LOC_Os01g57630.2 No alias Pentatricopeptide repeat-containing protein At1g55890,... 0.04 SeedPlants
LOC_Os01g58080.1 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.12 SeedPlants
LOC_Os02g42210.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.12 SeedPlants
MA_137206g0010 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.02 SeedPlants
MA_138370g0010 No alias Pentatricopeptide repeat-containing protein At1g80150,... 0.02 SeedPlants
MA_477021g0010 No alias Pentatricopeptide repeat-containing protein At1g61870,... 0.01 SeedPlants
Solyc02g062910.3.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.06 SeedPlants
Solyc02g079830.1.1 No alias Pentatricopeptide repeat-containing protein At3g13160,... 0.04 SeedPlants
Solyc02g085650.4.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.03 SeedPlants
Solyc03g031460.1.1 No alias Pentatricopeptide repeat-containing protein At3g13160,... 0.05 SeedPlants
Solyc05g012250.3.1 No alias Pentatricopeptide repeat-containing protein At1g80150,... 0.02 SeedPlants
Solyc10g005280.1.1 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 218 256
IPR002885 Pentatricopeptide_repeat 284 332
IPR002885 Pentatricopeptide_repeat 183 212
IPR002885 Pentatricopeptide_repeat 261 282
No external refs found!