AT3G08950 (HCC1)

Aliases : HCC1

Description : electron transport SCO1/SenC family protein

Gene families : OG_01_0002846 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002846_tree ,
OG_02_0002985 (LandPlants) Phylogenetic Tree(s): OG_02_0002985_tree ,
OG_03_0009453 (SeedPlants) Phylogenetic Tree(s): OG_03_0009453_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G08950
Cluster	HCCA: Cluster_210

Target	Alias	Description	ECC score	Gene Family Method
Solyc09g005640.3.1	No alias	component HCC/SCO1 of cytochrome c oxidase assembly	0.05	Archaeplastida
Zm00001e009748_P003	No alias	component HCC/SCO1 of cytochrome c oxidase assembly	0.03	Archaeplastida
Zm00001e013692_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
AMTR_s00069p00138950	evm_27.TU.AmTr_v1...	Cellular respiration.oxidative...	0.02	LandPlants
MA_32216g0010	No alias	component HCC/SCO1 of cytochrome c oxidase assembly	0.01	LandPlants
Solyc09g005640.3.1	No alias	component HCC/SCO1 of cytochrome c oxidase assembly	0.05	LandPlants
Zm00001e013692_P001	No alias	no hits & (original description: none)	0.05	LandPlants
AMTR_s00069p00138950	evm_27.TU.AmTr_v1...	Cellular respiration.oxidative...	0.02	SeedPlants
Solyc09g005640.3.1	No alias	component HCC/SCO1 of cytochrome c oxidase assembly	0.05	SeedPlants
Zm00001e013692_P001	No alias	no hits & (original description: none)	0.05	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006089	lactate metabolic process	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006626	protein targeting to mitochondrion	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006839	mitochondrial transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008535	respiratory chain complex IV assembly	ISS	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009438	methylglyoxal metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0017004	cytochrome complex assembly	None	Extended
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	RCA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033108	mitochondrial respiratory chain complex assembly	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0033617	mitochondrial cytochrome c oxidase assembly	IMP	Interproscan
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0042180	cellular ketone metabolic process	None	Extended
BP	GO:0042182	ketone catabolic process	None	Extended
BP	GO:0042886	amide transport	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046185	aldehyde catabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051596	methylglyoxal catabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0061727	methylglyoxal catabolic process to lactate	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0070585	protein localization to mitochondrion	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072655	establishment of protein localization to mitochondrion	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003782	SCO1/SenC	174	308

External Links

No external refs found!

AT3G08950 (HCC1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation