AT3G08950 (HCC1)


Aliases : HCC1

Description : electron transport SCO1/SenC family protein


Gene families : OG_01_0002846 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002846_tree ,
OG_02_0002985 (LandPlants) Phylogenetic Tree(s): OG_02_0002985_tree ,
OG_03_0009453 (SeedPlants) Phylogenetic Tree(s): OG_03_0009453_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G08950
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
Solyc09g005640.3.1 No alias component HCC/SCO1 of cytochrome c oxidase assembly 0.05 Archaeplastida
Zm00001e009748_P003 No alias component HCC/SCO1 of cytochrome c oxidase assembly 0.03 Archaeplastida
Zm00001e013692_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
AMTR_s00069p00138950 evm_27.TU.AmTr_v1... Cellular respiration.oxidative... 0.02 LandPlants
MA_32216g0010 No alias component HCC/SCO1 of cytochrome c oxidase assembly 0.01 LandPlants
Solyc09g005640.3.1 No alias component HCC/SCO1 of cytochrome c oxidase assembly 0.05 LandPlants
Zm00001e013692_P001 No alias no hits & (original description: none) 0.05 LandPlants
AMTR_s00069p00138950 evm_27.TU.AmTr_v1... Cellular respiration.oxidative... 0.02 SeedPlants
Solyc09g005640.3.1 No alias component HCC/SCO1 of cytochrome c oxidase assembly 0.05 SeedPlants
Zm00001e013692_P001 No alias no hits & (original description: none) 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IDA Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0006626 protein targeting to mitochondrion RCA Interproscan
BP GO:0008535 respiratory chain complex IV assembly ISS Interproscan
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione RCA Interproscan
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003782 SCO1/SenC 174 308
No external refs found!