AT3G08640

Description : Protein of unknown function (DUF3411)

Gene families : OG_01_0003344 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003344_tree ,
OG_02_0004099 (LandPlants) Phylogenetic Tree(s): OG_02_0004099_tree ,
OG_03_0005505 (SeedPlants) Phylogenetic Tree(s): OG_03_0005505_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G08640
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000269.110	No alias	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana	0.01	Archaeplastida
MA_107207g0010	No alias	Protein RETICULATA-RELATED 3, chloroplastic...	0.06	Archaeplastida
Pp3c2_34630V3.1	No alias	Protein of unknown function (DUF3411)	0.02	Archaeplastida
AMTR_s00101p00044120	evm_27.TU.AmTr_v1...	Protein RETICULATA-RELATED 3, chloroplastic...	0.01	LandPlants
MA_107207g0010	No alias	Protein RETICULATA-RELATED 3, chloroplastic...	0.06	LandPlants
AMTR_s00101p00044120	evm_27.TU.AmTr_v1...	Protein RETICULATA-RELATED 3, chloroplastic...	0.01	SeedPlants
MA_107207g0010	No alias	Protein RETICULATA-RELATED 3, chloroplastic...	0.06	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IMP	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009536	plastid	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009648	photoperiodism	IMP	Interproscan
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048366	leaf development	IMP	Interproscan
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR021825	RETICULATA-related	111	280

External Links

No external refs found!

AT3G08640

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation