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  5. AMTR_s00010p00225250

AMTR_s00010p00225250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.249

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG_01_0000097 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000097_tree ,
OG_02_0000048 (LandPlants) Phylogenetic Tree(s): OG_02_0000048_tree ,
OG_03_0000021 (SeedPlants) Phylogenetic Tree(s): OG_03_0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00225250
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.02 Archaeplastida
GSVIVT01036787001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.02 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.04 Archaeplastida
Gb_26175 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os04g54510.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os05g34160.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_192398g0010 No alias transcription factor (mTERF) 0.05 Archaeplastida
MA_3151g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_508g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c4_13990V3.1 No alias Mitochondrial transcription termination factor family protein 0.02 Archaeplastida
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g072540.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Zm00001e022322_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida
AMTR_s00010p00117910 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 LandPlants
GSVIVT01017772001 No alias RNA biosynthesis.organelle... 0.02 LandPlants
GSVIVT01036787001 No alias RNA biosynthesis.organelle... 0.03 LandPlants
Gb_03682 No alias transcription factor (mTERF) 0.02 LandPlants
Gb_26175 No alias transcription factor (mTERF) 0.02 LandPlants
Gb_26213 No alias transcription factor (mTERF) 0.02 LandPlants
LOC_Os04g54510.1 No alias transcription factor (mTERF) 0.02 LandPlants
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.03 LandPlants
LOC_Os06g12080.1 No alias transcription factor (mTERF) 0.02 LandPlants
MA_122549g0010 No alias transcription factor (mTERF) 0.02 LandPlants
MA_192398g0010 No alias transcription factor (mTERF) 0.03 LandPlants
MA_31885g0010 No alias transcription factor (mTERF) 0.02 LandPlants
MA_502709g0010 No alias transcription factor (mTERF) 0.02 LandPlants
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.02 LandPlants
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.02 LandPlants
Solyc04g072550.3.1 No alias transcription factor (mTERF) 0.02 LandPlants
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.02 LandPlants
GSVIVT01017772001 No alias RNA biosynthesis.organelle... 0.02 SeedPlants
Gb_26175 No alias transcription factor (mTERF) 0.02 SeedPlants
Gb_26213 No alias transcription factor (mTERF) 0.02 SeedPlants
LOC_Os04g54510.1 No alias transcription factor (mTERF) 0.02 SeedPlants
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.03 SeedPlants
LOC_Os06g12080.1 No alias transcription factor (mTERF) 0.02 SeedPlants
MA_122549g0010 No alias transcription factor (mTERF) 0.02 SeedPlants
MA_33244g0010 No alias transcription factor (mTERF) 0.02 SeedPlants
MA_502709g0010 No alias transcription factor (mTERF) 0.02 SeedPlants
Solyc04g072520.3.1 No alias transcription factor (mTERF) 0.02 SeedPlants
Solyc04g072530.2.1 No alias transcription factor (mTERF) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003690 MTERF 33 221
IPR003690 MTERF 198 292
No external refs found!