AT3G07610 (IBM1)


Aliases : IBM1

Description : Transcription factor jumonji (jmjC) domain-containing protein


Gene families : OG_01_0000515 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000515_tree ,
OG_02_0000563 (LandPlants) Phylogenetic Tree(s): OG_02_0000563_tree ,
OG_03_0000492 (SeedPlants) Phylogenetic Tree(s): OG_03_0000492_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G07610
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Pp3c14_6480V3.1 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.02 Archaeplastida
AMTR_s00057p00206860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated RCA Interproscan
BP GO:0006487 protein N-linked glycosylation RCA Interproscan
BP GO:0009555 pollen development IMP Interproscan
BP GO:0009908 flower development IMP Interproscan
BP GO:0010468 regulation of gene expression IMP Interproscan
MF GO:0031490 chromatin DNA binding IDA Interproscan
MF GO:0032454 histone demethylase activity (H3-K9 specific) IMP Interproscan
MF GO:0032454 histone demethylase activity (H3-K9 specific) ISS Interproscan
BP GO:0032776 DNA methylation on cytosine IMP Interproscan
BP GO:0032776 DNA methylation on cytosine IGI Interproscan
BP GO:0033169 histone H3-K9 demethylation IMP Interproscan
BP GO:0033169 histone H3-K9 demethylation IGI Interproscan
BP GO:0048366 leaf development IMP Interproscan
BP GO:0070919 production of siRNA involved in chromatin silencing by small RNA IMP Interproscan
BP GO:0080188 gene silencing by RNA-directed DNA methylation IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003347 JmjC_dom 747 843
No external refs found!