AT3G07060 (emb1974)

Aliases : emb1974

Description : NHL domain-containing protein

Gene families : OG_01_0006786 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006786_tree ,
OG_02_0005553 (LandPlants) Phylogenetic Tree(s): OG_02_0005553_tree ,
OG_03_0009105 (SeedPlants) Phylogenetic Tree(s): OG_03_0009105_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G07060
Cluster	HCCA: Cluster_253

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00129330	evm_27.TU.AmTr_v1...	Probable ATP synthase 24 kDa subunit, mitochondrial...	0.02	Archaeplastida
AMTR_s00067p00129330	evm_27.TU.AmTr_v1...	Probable ATP synthase 24 kDa subunit, mitochondrial...	0.02	SeedPlants
LOC_Os08g04120.1	No alias	no hits & (original description: none)	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006333	chromatin assembly or disassembly	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006346	DNA methylation-dependent heterochromatin assembly	RCA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	NAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016569	covalent chromatin modification	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0031048	heterochromatin assembly by small RNA	RCA	Interproscan
BP	GO:0031497	chromatin assembly	None	Extended
BP	GO:0031507	heterochromatin assembly	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034401	chromatin organization involved in regulation of transcription	None	Extended
BP	GO:0034968	histone lysine methylation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051567	histone H3-K9 methylation	RCA	Interproscan
BP	GO:0061647	histone H3-K9 modification	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0097549	chromatin organization involved in negative regulation of transcription	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G07060 (emb1974)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation