AT3G06380 (TLP9, ATTLP9)


Aliases : TLP9, ATTLP9

Description : tubby-like protein 9


Gene families : OG_01_0000335 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000335_tree ,
OG_02_0017404 (LandPlants) Phylogenetic Tree(s): OG_02_0017404_tree ,
OG_03_0024946 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G06380
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.05 Archaeplastida
GSVIVT01017810001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
Gb_22686 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os01g48370.1 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os05g48670.1 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os08g01290.5 No alias transcription factor (TUB) 0.02 Archaeplastida
Pp3c20_2190V3.1 No alias tubby like protein 3 0.02 Archaeplastida
Pp3c23_17770V3.1 No alias tubby like protein 3 0.02 Archaeplastida
Pp3c24_19540V3.1 No alias tubby like protein 3 0.02 Archaeplastida
Pp3c8_18450V3.1 No alias tubby like protein 3 0.02 Archaeplastida
Smo83983 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
Smo85745 No alias RNA biosynthesis.transcriptional activation.TUB... 0.04 Archaeplastida
Zm00001e024284_P002 No alias transcription factor (TUB) 0.04 Archaeplastida
Mp3g02190.1 No alias transcription factor (TUB) 0.04 LandPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
MF GO:0008081 phosphoric diester hydrolase activity ISS Interproscan
BP GO:0009620 response to fungus IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000007 Tubby_C 97 375
IPR001810 F-box_dom 31 86
No external refs found!