1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e011479_P001

Zm00001e011479_P001


Description : SYP1-group Qa-type SNARE component


Gene families : OG_01_0000372 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000372_tree ,
OG_02_0002991 (LandPlants) Phylogenetic Tree(s): OG_02_0002991_tree ,
OG_03_0004212 (SeedPlants) Phylogenetic Tree(s): OG_03_0004212_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e011479_P001
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT1G11250 SYP125, ATSYP125 syntaxin of plants 125 0.03 Archaeplastida
AT1G61290 ATSYP124, SYP124 syntaxin of plants 124 0.03 Archaeplastida
AT3G03800 ATSYP131, SYP131 syntaxin of plants 131 0.02 Archaeplastida
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.03 Archaeplastida
GSVIVT01030578001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
LOC_Os02g11890.1 No alias SYP1-group Qa-type SNARE component 0.03 Archaeplastida
LOC_Os03g52650.1 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 Archaeplastida
LOC_Os07g07000.1 No alias SYP1-group Qa-type SNARE component 0.09 Archaeplastida
Pp3c3_13140V3.1 No alias syntaxin of plants 131 0.02 Archaeplastida
Smo25349 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Solyc12g005580.2.1 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
AT3G03800 ATSYP131, SYP131 syntaxin of plants 131 0.02 LandPlants
GSVIVT01030607001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 LandPlants
LOC_Os07g07000.1 No alias SYP1-group Qa-type SNARE component 0.09 LandPlants
LOC_Os07g07000.1 No alias SYP1-group Qa-type SNARE component 0.08 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 242 293
IPR006011 Syntaxin_N 35 240
No external refs found!