AT3G05480 (RAD9, ATRAD9)

Aliases : RAD9, ATRAD9

Description : cell cycle checkpoint control protein family

Gene families : OG_01_0005650 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005650_tree ,
OG_02_0005938 (LandPlants) Phylogenetic Tree(s): OG_02_0005938_tree ,
OG_03_0009303 (SeedPlants) Phylogenetic Tree(s): OG_03_0009303_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G05480
Cluster	HCCA: Cluster_253

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os03g22450.1	No alias	RAD9 spindle assembly checkpoint protein	0.04	Archaeplastida
Mp5g00130.1	No alias	RAD9 spindle assembly checkpoint protein	0.03	Archaeplastida
LOC_Os03g22450.1	No alias	RAD9 spindle assembly checkpoint protein	0.03	LandPlants
Mp5g00130.1	No alias	RAD9 spindle assembly checkpoint protein	0.02	LandPlants
LOC_Os03g22450.1	No alias	RAD9 spindle assembly checkpoint protein	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	ISS	Interproscan
BP	GO:0006282	regulation of DNA repair	IMP	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:2001020	regulation of response to DNA damage stimulus	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007268	Rad9/Ddc1	13	282

External Links

No external refs found!

AT3G05480 (RAD9, ATRAD9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation