AMTR_s00010p00216390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.222

Description : Cell wall.cellulose.synthesis.cellulose synthase complex (CSC).CSC-interacting proteins.CSI-type CSC-interactive protein


Gene families : OG_01_0002727 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002727_tree ,
OG_02_0001913 (LandPlants) Phylogenetic Tree(s): OG_02_0001913_tree ,
OG_03_0001932 (SeedPlants) Phylogenetic Tree(s): OG_03_0001932_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00216390
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AT2G22125 CSI1 binding 0.05 Archaeplastida
Gb_38411 No alias CSI-type cellulose synthase CSC-interactive protein 0.03 Archaeplastida
LOC_Os06g11990.1 No alias CSI-type cellulose synthase CSC-interactive protein 0.03 Archaeplastida
Mp5g20900.1 No alias CSI-type cellulose synthase CSC-interactive protein 0.04 Archaeplastida
Pp3c19_16600V3.1 No alias binding 0.04 Archaeplastida
Smo90812 No alias Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 Archaeplastida
AT2G22125 CSI1 binding 0.05 LandPlants
Gb_38411 No alias CSI-type cellulose synthase CSC-interactive protein 0.03 LandPlants
LOC_Os06g11990.1 No alias CSI-type cellulose synthase CSC-interactive protein 0.02 LandPlants
Mp5g20900.1 No alias CSI-type cellulose synthase CSC-interactive protein 0.02 LandPlants
Smo90812 No alias Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 LandPlants
AT2G22125 CSI1 binding 0.05 SeedPlants
Gb_18151 No alias CSI-type cellulose synthase CSC-interactive protein 0.02 SeedPlants
Gb_38411 No alias CSI-type cellulose synthase CSC-interactive protein 0.03 SeedPlants
LOC_Os06g11990.1 No alias CSI-type cellulose synthase CSC-interactive protein 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000008 C2_dom 2037 2115
IPR000225 Armadillo 525 564
No external refs found!