Zm00001e010524_P001


Description : THA8 plastidial RNA splicing factor


Gene families : OG_01_0000306 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000306_tree ,
OG_02_0000732 (LandPlants) Phylogenetic Tree(s): OG_02_0000732_tree ,
OG_03_0002392 (SeedPlants) Phylogenetic Tree(s): OG_03_0002392_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e010524_P001
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00023060 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AMTR_s00066p00197720 evm_27.TU.AmTr_v1... Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.02 Archaeplastida
Gb_18843 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.02 Archaeplastida
Gb_36199 No alias Pentatricopeptide repeat-containing protein At4g39620,... 0.02 Archaeplastida
MA_10428348g0010 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.04 Archaeplastida
MA_946756g0010 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.03 Archaeplastida
Pp3c8_4580V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
Solyc01g057200.4.1 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.01 Archaeplastida
Solyc08g061590.4.1 No alias No annotation 0.04 Archaeplastida
AMTR_s00066p00023060 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 LandPlants
AMTR_s00066p00197720 evm_27.TU.AmTr_v1... Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.02 LandPlants
Gb_18843 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.02 LandPlants
MA_10428348g0010 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.04 LandPlants
MA_946756g0010 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.03 LandPlants
Solyc08g061590.4.1 No alias No annotation 0.04 LandPlants
AMTR_s00066p00023060 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 SeedPlants
Solyc08g061590.4.1 No alias No annotation 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 181 204
IPR002885 Pentatricopeptide_repeat 137 179
No external refs found!