AT3G04790


Description : Ribose 5-phosphate isomerase, type A protein


Gene families : OG_01_0003799 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003799_tree ,
OG_02_0004058 (LandPlants) Phylogenetic Tree(s): OG_02_0004058_tree ,
OG_03_0004338 (SeedPlants) Phylogenetic Tree(s): OG_03_0004338_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G04790
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271180 evm_27.TU.AmTr_v1... Carbohydrate metabolism.oxidative pentose phosphate... 0.08 Archaeplastida
Cpa|evm.model.tig00000551.5 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.06 Archaeplastida
Cre03.g187450 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.06 Archaeplastida
LOC_Os07g08030.1 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.16 Archaeplastida
MA_10435626g0040 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.02 Archaeplastida
Mp8g18400.1 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.16 Archaeplastida
Pp3c5_21490V3.1 No alias Ribose 5-phosphate isomerase, type A protein 0.03 Archaeplastida
Smo74055 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.06 Archaeplastida
Solyc01g097460.3.1 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.11 Archaeplastida
Zm00001e032919_P001 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.14 Archaeplastida
AMTR_s00002p00271180 evm_27.TU.AmTr_v1... Carbohydrate metabolism.oxidative pentose phosphate... 0.06 LandPlants
Gb_35011 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.02 LandPlants
LOC_Os07g08030.1 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.15 LandPlants
MA_10435626g0040 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.01 LandPlants
Mp8g18400.1 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.16 LandPlants
Pp3c5_21490V3.1 No alias Ribose 5-phosphate isomerase, type A protein 0.03 LandPlants
Smo74055 No alias Carbohydrate metabolism.oxidative pentose phosphate... 0.05 LandPlants
Solyc01g097460.3.1 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.1 LandPlants
Zm00001e032919_P001 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.14 LandPlants
AMTR_s00002p00271180 evm_27.TU.AmTr_v1... Carbohydrate metabolism.oxidative pentose phosphate... 0.06 SeedPlants
Gb_35011 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.02 SeedPlants
LOC_Os07g08030.1 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.15 SeedPlants
MA_10435626g0040 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.01 SeedPlants
Solyc01g097460.3.1 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.11 SeedPlants
Zm00001e032919_P001 No alias phosphopentose isomerase. ribose 5-phosphate isomerase 0.13 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process RCA Interproscan
BP GO:0000165 MAPK cascade RCA Interproscan
BP GO:0006546 glycine catabolic process RCA Interproscan
BP GO:0006569 tryptophan catabolic process RCA Interproscan
BP GO:0006612 protein targeting to membrane RCA Interproscan
BP GO:0006636 unsaturated fatty acid biosynthetic process RCA Interproscan
BP GO:0006733 obsolete oxidoreduction coenzyme metabolic process RCA Interproscan
BP GO:0006766 vitamin metabolic process RCA Interproscan
BP GO:0008652 cellular amino acid biosynthetic process RCA Interproscan
BP GO:0009072 aromatic amino acid family metabolic process RCA Interproscan
BP GO:0009106 lipoate metabolic process RCA Interproscan
BP GO:0009108 obsolete coenzyme biosynthetic process RCA Interproscan
BP GO:0009117 nucleotide metabolic process RCA Interproscan
BP GO:0009409 response to cold RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
BP GO:0009595 detection of biotic stimulus RCA Interproscan
BP GO:0009684 indoleacetic acid biosynthetic process RCA Interproscan
BP GO:0009695 jasmonic acid biosynthetic process RCA Interproscan
BP GO:0009697 salicylic acid biosynthetic process RCA Interproscan
BP GO:0009735 response to cytokinin IDA Interproscan
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Interproscan
BP GO:0009867 jasmonic acid mediated signaling pathway RCA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0010200 response to chitin RCA Interproscan
BP GO:0010310 regulation of hydrogen peroxide metabolic process RCA Interproscan
BP GO:0010363 regulation of plant-type hypersensitive response RCA Interproscan
BP GO:0019253 reductive pentose-phosphate cycle NAS Interproscan
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Interproscan
BP GO:0019344 cysteine biosynthetic process RCA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
BP GO:0019748 secondary metabolic process RCA Interproscan
BP GO:0031348 negative regulation of defense response RCA Interproscan
BP GO:0042742 defense response to bacterium IEP Interproscan
BP GO:0042742 defense response to bacterium RCA Interproscan
BP GO:0043900 regulation of multi-organism process RCA Interproscan
BP GO:0044272 sulfur compound biosynthetic process RCA Interproscan
BP GO:0050832 defense response to fungus RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004788 Ribose5P_isomerase_type_A 94 270
No external refs found!