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  5. Zm00001e007472_P001

Zm00001e007472_P001


Description : transcription factor (TUB)


Gene families : OG_01_0000335 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000335_tree ,
OG_02_0071058 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0065063 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e007472_P001
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00040910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.04 Archaeplastida
AMTR_s00057p00153680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
Cpa|evm.model.tig00020603.38 No alias RNA biosynthesis.transcriptional activation.TUB... 0.01 Archaeplastida
Gb_35372 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os02g47640.1 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os03g22800.1 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os04g59130.1 No alias transcription factor (TUB) 0.04 Archaeplastida
LOC_Os05g36190.1 No alias transcription factor (TUB) 0.04 Archaeplastida
Mp6g01640.1 No alias transcription factor (TUB) 0.02 Archaeplastida
Pp3c8_18450V3.1 No alias tubby like protein 3 0.03 Archaeplastida
Solyc01g067680.3.1 No alias transcription factor (TUB) 0.03 Archaeplastida
Solyc09g074510.3.1 No alias transcription factor (TUB) 0.04 Archaeplastida
Zm00001e016851_P001 No alias transcription factor (TUB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000007 Tubby_C 266 587
IPR001810 F-box_dom 202 255
No external refs found!