AT3G02060


Description : DEAD/DEAH box helicase, putative


Gene families : OG_01_0004596 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004596_tree ,
OG_02_0006913 (LandPlants) Phylogenetic Tree(s): OG_02_0006913_tree ,
OG_03_0008362 (SeedPlants) Phylogenetic Tree(s): OG_03_0008362_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G02060
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00242110 evm_27.TU.AmTr_v1... ATP-dependent DNA helicase At3g02060, chloroplastic... 0.07 Archaeplastida
GSVIVT01032955001 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.06 Archaeplastida
Gb_38755 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.05 Archaeplastida
LOC_Os11g32880.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.08 Archaeplastida
MA_10297916g0010 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.02 Archaeplastida
Mp2g07230.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.02 Archaeplastida
Smo77276 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.04 Archaeplastida
Solyc02g094590.3.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.09 Archaeplastida
Zm00001e011170_P004 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.12 Archaeplastida
AMTR_s00016p00242110 evm_27.TU.AmTr_v1... ATP-dependent DNA helicase At3g02060, chloroplastic... 0.06 LandPlants
GSVIVT01032955001 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.05 LandPlants
Gb_38755 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.05 LandPlants
LOC_Os11g32880.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.08 LandPlants
Mp2g07230.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.02 LandPlants
Smo77276 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.03 LandPlants
Solyc02g094590.3.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.09 LandPlants
Zm00001e011170_P004 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.13 LandPlants
AMTR_s00016p00242110 evm_27.TU.AmTr_v1... ATP-dependent DNA helicase At3g02060, chloroplastic... 0.05 SeedPlants
GSVIVT01032955001 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.05 SeedPlants
Gb_38755 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.05 SeedPlants
LOC_Os11g32880.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.09 SeedPlants
Solyc02g094590.3.1 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.09 SeedPlants
Zm00001e011170_P004 No alias ATP-dependent DNA helicase At3g02060, chloroplastic... 0.12 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006783 heme biosynthetic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 470 577
IPR011545 DEAD/DEAH_box_helicase_dom 292 430
IPR003711 CarD-like/TRCF_domain 144 242
No external refs found!