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  5. Zm00001e007090_P001

Zm00001e007090_P001


Description : SSU processome assembly factor (TOZ)


Gene families : OG_01_0003962 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003962_tree ,
OG_02_0005807 (LandPlants) Phylogenetic Tree(s): OG_02_0005807_tree ,
OG_03_0006787 (SeedPlants) Phylogenetic Tree(s): OG_03_0006787_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e007090_P001
Cluster HCCA: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
AT5G16750 TOZ Transducin family protein / WD-40 repeat family protein 0.1 Archaeplastida
Cpa|evm.model.tig00000704.60 No alias No description available 0.01 Archaeplastida
Cpa|evm.model.tig00000704.61 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Cre07.g344050 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.08 Archaeplastida
Mp8g08070.1 No alias SSU processome assembly factor (TOZ) 0.05 Archaeplastida
Pp3c19_12460V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.06 Archaeplastida
Smo80645 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.1 Archaeplastida
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 LandPlants
AT5G16750 TOZ Transducin family protein / WD-40 repeat family protein 0.09 LandPlants
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 LandPlants
Gb_13772 No alias SSU processome assembly factor (TOZ) 0.02 LandPlants
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.08 LandPlants
MA_566936g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp8g08070.1 No alias SSU processome assembly factor (TOZ) 0.04 LandPlants
Pp3c19_12460V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.06 LandPlants
Smo80645 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 LandPlants
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.09 LandPlants
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 SeedPlants
AT5G16750 TOZ Transducin family protein / WD-40 repeat family protein 0.09 SeedPlants
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 SeedPlants
Gb_13772 No alias SSU processome assembly factor (TOZ) 0.02 SeedPlants
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.08 SeedPlants
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0032040 small-subunit processome IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 544 576
IPR001680 WD40_repeat 444 481
IPR001680 WD40_repeat 503 534
IPR001680 WD40_repeat 580 617
IPR001680 WD40_repeat 108 145
IPR001680 WD40_repeat 151 189
IPR001680 WD40_repeat 399 439
IPR001680 WD40_repeat 194 231
IPR013934 SSU_processome_Utp13 682 815
No external refs found!