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AT3G01340


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0002497 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002497_tree ,
OG_02_0002542 (LandPlants) Phylogenetic Tree(s): OG_02_0002542_tree ,
OG_03_0004509 (SeedPlants) Phylogenetic Tree(s): OG_03_0004509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G01340
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Pp3c22_17920V3.1 No alias transducin family protein / WD-40 repeat family protein 0.04 Archaeplastida
Solyc02g087300.1.1 No alias scaffolding component Sec13 of coat protein complex 0.03 Archaeplastida
Pp3c19_9370V3.1 No alias transducin family protein / WD-40 repeat family protein 0.02 LandPlants
Pp3c22_17920V3.1 No alias transducin family protein / WD-40 repeat family protein 0.04 LandPlants
Solyc02g087300.1.1 No alias scaffolding component Sec13 of coat protein complex 0.03 LandPlants
AMTR_s00101p00099400 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 SeedPlants
Solyc02g087300.1.1 No alias scaffolding component Sec13 of coat protein complex 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006886 intracellular protein transport ISS Interproscan
BP GO:0006900 vesicle budding from membrane ISS Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 147 192
IPR001680 WD40_repeat 4 37
IPR001680 WD40_repeat 96 132
IPR001680 WD40_repeat 206 241
IPR001680 WD40_repeat 47 86
No external refs found!