AT3G01180 (SS2, AtSS2)


Aliases : SS2, AtSS2

Description : starch synthase 2


Gene families : OG_01_0000161 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000161_tree ,
OG_02_0002981 (LandPlants) Phylogenetic Tree(s): OG_02_0002981_tree ,
OG_03_0003717 (SeedPlants) Phylogenetic Tree(s): OG_03_0003717_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G01180
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
MA_10430152g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g20000.1 No alias starch synthase (SSIII) 0.02 Archaeplastida
Pp3c18_20850V3.1 No alias UDP-Glycosyltransferase superfamily protein 0.02 Archaeplastida
Zm00001e027473_P001 No alias starch synthase (SSIV) 0.06 Archaeplastida
Zm00001e039962_P001 No alias starch synthase (SSIII) 0.03 Archaeplastida
Zm00001e041682_P002 No alias starch synthase (SSIII) 0.03 Archaeplastida
Pp3c22_6120V3.1 No alias starch synthase 2 0.02 LandPlants

Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia RCA Interproscan
MF GO:0009011 starch synthase activity IMP Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0010021 amylopectin biosynthetic process IMP Interproscan
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process RCA Interproscan
MF GO:0016757 transferase activity, transferring glycosyl groups ISS Interproscan
BP GO:0019375 galactolipid biosynthetic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 302 544
IPR001296 Glyco_trans_1 604 745
No external refs found!