Zm00001e005702_P001


Description : phytochrome photoreceptor (PHY)


Gene families : OG_01_0000908 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000908_tree ,
OG_02_0000972 (LandPlants) Phylogenetic Tree(s): OG_02_0000972_tree ,
OG_03_0003182 (SeedPlants) Phylogenetic Tree(s): OG_03_0003182_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e005702_P001
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00076620 evm_27.TU.AmTr_v1... External stimuli response.light.red/far red light.PHY... 0.02 Archaeplastida
Cpa|evm.model.tig00020510.131 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
GSVIVT01030081001 No alias External stimuli response.light.red/far red light.PHY... 0.05 Archaeplastida
GSVIVT01031354001 No alias External stimuli response.light.red/far red light.PHY... 0.06 Archaeplastida
GSVIVT01034989001 No alias External stimuli response.light.red/far red light.PHY... 0.04 Archaeplastida
MA_10435530g0010 No alias phytochrome photoreceptor (PHY). temperature sensor... 0.03 Archaeplastida
Pp3c25_2610V3.1 No alias phytochrome B 0.03 Archaeplastida
GSVIVT01030081001 No alias External stimuli response.light.red/far red light.PHY... 0.05 LandPlants
GSVIVT01031354001 No alias External stimuli response.light.red/far red light.PHY... 0.06 LandPlants
GSVIVT01034989001 No alias External stimuli response.light.red/far red light.PHY... 0.04 LandPlants
MA_10435530g0010 No alias phytochrome photoreceptor (PHY). temperature sensor... 0.03 LandPlants
MA_73153g0010 No alias phytochrome photoreceptor (PHY) 0.01 LandPlants
Pp3c25_2610V3.1 No alias phytochrome B 0.03 LandPlants
Solyc02g071260.3.1 No alias phytochrome photoreceptor (PHY). temperature sensor... 0.02 LandPlants
GSVIVT01031354001 No alias External stimuli response.light.red/far red light.PHY... 0.06 SeedPlants
MA_73153g0010 No alias phytochrome photoreceptor (PHY) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
BP GO:0009584 detection of visible light IEA Interproscan
BP GO:0018298 protein-chromophore linkage IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003594 HATPase_C 1007 1112
IPR013654 PAS_2 68 183
IPR013515 Phytochrome_cen-reg 412 584
IPR003018 GAF 217 399
IPR013767 PAS_fold 751 873
IPR013767 PAS_fold 621 734
IPR003661 HisK_dim/P 900 958
No external refs found!