AMTR_s00010p00188970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.165

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional BXL-type alpha-L-arabinofuranosidase and beta-D-xylosidase


Gene families : OG_01_0000435 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000435_tree ,
OG_02_0000257 (LandPlants) Phylogenetic Tree(s): OG_02_0000257_tree ,
OG_03_0002964 (SeedPlants) Phylogenetic Tree(s): OG_03_0002964_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00188970
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00064880 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
AT1G02640 ATBXL2, BXL2 beta-xylosidase 2 0.03 Archaeplastida
GSVIVT01006776001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.06 Archaeplastida
GSVIVT01017660001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
Solyc04g072850.4.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
Zm00001e007432_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
GSVIVT01006776001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 LandPlants
GSVIVT01017660001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 LandPlants
MA_182289g0010 No alias no hits & (original description: none) 0.02 LandPlants
Solyc04g072850.4.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 LandPlants
Zm00001e007432_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 LandPlants
AT5G10560 No alias Glycosyl hydrolase family protein 0.02 SeedPlants
GSVIVT01006776001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR026891 Fn3-like 701 769
IPR002772 Glyco_hydro_3_C 403 635
IPR001764 Glyco_hydro_3_N 65 359
No external refs found!