AT2G47030 (VGDH1)


Aliases : VGDH1

Description : Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG_01_0014060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0014060_tree ,
OG_02_0013989 (LandPlants) Phylogenetic Tree(s): OG_02_0013989_tree ,
OG_03_0015163 (SeedPlants) Phylogenetic Tree(s): OG_03_0015163_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G47030
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT2G47050 No alias Plant invertase/pectin methylesterase inhibitor... 0.07 Archaeplastida
Solyc06g084620.1.1 No alias pectin methylesterase 0.14 Archaeplastida
AT2G47050 No alias Plant invertase/pectin methylesterase inhibitor... 0.06 LandPlants
Solyc06g084620.1.1 No alias pectin methylesterase 0.12 LandPlants
AT2G47050 No alias Plant invertase/pectin methylesterase inhibitor... 0.05 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0009505 plant-type cell wall ISS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
MF GO:0030599 pectinesterase activity ISS Interproscan
CC GO:0090406 pollen tube IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 40 186
IPR000070 Pectinesterase_cat 277 571
No external refs found!