Zm00001e004554_P002


Description : transcription factor (ARF)


Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree ,
OG_02_0001322 (LandPlants) Phylogenetic Tree(s): OG_02_0001322_tree ,
OG_03_0001040 (SeedPlants) Phylogenetic Tree(s): OG_03_0001040_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e004554_P002
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00211p00025860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
AT1G59750 ARF1 auxin response factor 1 0.03 Archaeplastida
AT2G33860 ARF3, ETT Transcriptional factor B3 family protein /... 0.02 Archaeplastida
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.03 Archaeplastida
AT5G60450 ARF4 auxin response factor 4 0.03 Archaeplastida
GSVIVT01025159001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
LOC_Os04g56850.1 No alias transcription factor (ARF) 0.04 Archaeplastida
MA_40335g0010 No alias transcription factor (ARF) 0.02 Archaeplastida
Pp3c26_11550V3.1 No alias auxin response factor 6 0.03 Archaeplastida
Pp3c4_12970V3.1 No alias auxin response factor 16 0.02 Archaeplastida
Solyc01g096070.3.1 No alias transcription factor (ARF) 0.03 Archaeplastida
Solyc06g075150.3.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Solyc07g042260.4.1 No alias transcription factor (ARF) 0.03 Archaeplastida
Solyc06g075150.3.1 No alias transcription factor (ARF) 0.02 LandPlants
LOC_Os10g33940.1 No alias transcription factor (ARF) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009725 response to hormone IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 115 216
IPR010525 Auxin_resp 271 354
No external refs found!