AT2G46790 (APRR9, TL1, PRR9)

Aliases : APRR9, TL1, PRR9

Description : pseudo-response regulator 9

Gene families : OG_01_0000168 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000168_tree ,
OG_02_0000079 (LandPlants) Phylogenetic Tree(s): OG_02_0000079_tree ,
OG_03_0005418 (SeedPlants) Phylogenetic Tree(s): OG_03_0005418_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G46790
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
Pp3c16_18610V3.1	No alias	pseudo-response regulator 7	0.03	Archaeplastida
Solyc10g005030.4.1	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.19	Archaeplastida
Zm00001e034804_P002	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e035953_P001	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.06	Archaeplastida
AMTR_s00001p00271570	evm_27.TU.AmTr_v1...	Two-component response regulator-like PRR95 OS=Oryza...	0.02	LandPlants
GSVIVT01025087001	No alias	Two-component response regulator-like APRR7...	0.03	LandPlants
GSVIVT01025088001	No alias	Multi-process regulation.circadian clock.PRR...	0.03	LandPlants
Gb_23159	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.02	LandPlants
LOC_Os03g17570.3	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.03	LandPlants
Pp3c16_18610V3.1	No alias	pseudo-response regulator 7	0.03	LandPlants
Smo16699	No alias	Two-component response regulator-like APRR7...	0.03	LandPlants
Smo38684	No alias	Multi-process regulation.circadian clock.PRR...	0.03	LandPlants
Solyc10g005030.4.1	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.19	LandPlants
Zm00001e034804_P002	No alias	no hits & (original description: none)	0.05	LandPlants
Zm00001e035953_P001	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.06	LandPlants
Zm00001e038444_P001	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.03	LandPlants
AMTR_s00001p00271570	evm_27.TU.AmTr_v1...	Two-component response regulator-like PRR95 OS=Oryza...	0.02	SeedPlants
Solyc10g005030.4.1	No alias	PRR circadian clock time-of-day-dependent expressed repressor	0.18	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IPI	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007623	circadian rhythm	IMP	Interproscan
BP	GO:0007623	circadian rhythm	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	IGI	Interproscan
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010017	red or far-red light signaling pathway	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045892	negative regulation of transcription, DNA-templated	IDA	Interproscan
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	39	150
IPR010402	CCT_domain	417	458

External Links

No external refs found!

AT2G46790 (APRR9, TL1, PRR9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation