Zm00001e004314_P001


Description : Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana (sp|q9lff1|pp281_arath : 808.0)


Gene families : OG_01_0010963 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010963_tree ,
OG_02_0010911 (LandPlants) Phylogenetic Tree(s): OG_02_0010911_tree ,
OG_03_0010842 (SeedPlants) Phylogenetic Tree(s): OG_03_0010842_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e004314_P001
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00087690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g53700,... 0.03 Archaeplastida
AT3G53700 MEE40 Pentatricopeptide repeat (PPR) superfamily protein 0.14 Archaeplastida
GSVIVT01025524001 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.07 Archaeplastida
LOC_Os03g40020.1 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.11 Archaeplastida
Solyc09g010450.1.1 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.08 Archaeplastida
AMTR_s00012p00087690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g53700,... 0.02 LandPlants
AT3G53700 MEE40 Pentatricopeptide repeat (PPR) superfamily protein 0.14 LandPlants
GSVIVT01025524001 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.06 LandPlants
LOC_Os03g40020.1 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.1 LandPlants
Solyc09g010450.1.1 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.07 LandPlants
AMTR_s00012p00087690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g53700,... 0.02 SeedPlants
AT3G53700 MEE40 Pentatricopeptide repeat (PPR) superfamily protein 0.12 SeedPlants
GSVIVT01025524001 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.06 SeedPlants
LOC_Os03g40020.1 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.1 SeedPlants
Solyc09g010450.1.1 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.07 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 162 191
IPR002885 Pentatricopeptide_repeat 617 662
IPR002885 Pentatricopeptide_repeat 193 240
IPR002885 Pentatricopeptide_repeat 474 522
IPR002885 Pentatricopeptide_repeat 546 592
IPR002885 Pentatricopeptide_repeat 298 345
IPR002885 Pentatricopeptide_repeat 368 417
IPR002885 Pentatricopeptide_repeat 260 285
IPR002885 Pentatricopeptide_repeat 435 467
No external refs found!