Cre13.g586916


Description : 27.1.1 RNA.processing.splicing encodes an SC35-like splicing factor of 28 kD localized to the nuclear specks. SC35-like splicing factor 28 (SCL28)


Gene families : OG_01_0000558 (Gene family) Phylogenetic Tree(s): OG0000558_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre13.g586916
Cluster HCCA cluster: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G55310 SR33, At-SCL33,... SC35-like splicing factor 33 0.02 Gene family
AT3G55460 SCL30, At-SCL30 SC35-like splicing factor 30 0.03 Gene family
Cpa|evm.model.tig00000402.16 No alias 27.1.1 RNA.processing.splicing Encodes a SR spliceosome... 0.03 Gene family
GSVIVT01016562001 No alias 27.1.1 RNA.processing.splicing encodes an SC35-like... 0.04 Gene family
GSVIVT01022010001 No alias 27.1.1 RNA.processing.splicing encodes an SC35-like... 0.03 Gene family
LOC_Os03g24890 Os03g0363800 27.1.1 RNA.processing.splicing encodes an SC35-like... 0.01 Gene family
LOC_Os07g43950 Os07g0633200 27.1.1 RNA.processing.splicing Encodes a SR spliceosome... 0.01 Gene family
LOC_Os12g38430 Os12g0572400 27.1.1 RNA.processing.splicing encodes an SC35-like... 0.03 Gene family
Solyc01g005820.3.1 Solyc01g005820.3 No description available 0.03 Gene family
Zm00001d022243 GRMZM5G867185 27.1.1 RNA.processing.splicing Encodes a SR spliceosome... 0.02 Gene family
Zm00001d048609 GRMZM2G145725 27.1.1 RNA.processing.splicing encodes an SC35-like... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 53 122
No external refs found!