AT2G44350 (CSY4, ATCS)

Aliases : CSY4, ATCS

Description : Citrate synthase family protein

Gene families : OG_01_0002366 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002366_tree ,
OG_02_0002736 (LandPlants) Phylogenetic Tree(s): OG_02_0002736_tree ,
OG_03_0003553 (SeedPlants) Phylogenetic Tree(s): OG_03_0003553_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G44350
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00238170	evm_27.TU.AmTr_v1...	Cellular respiration.tricarboxylic acid cycle.citrate synthase	0.03	Archaeplastida
Cpa\|evm.model.tig00020556.34	No alias	Citrate synthase, mitochondrial OS=Daucus carota	0.02	Archaeplastida
Cpa\|evm.model.tig00021127.109	No alias	Citrate synthase, mitochondrial OS=Daucus carota	0.02	Archaeplastida
Cpa\|evm.model.tig00021127.110	No alias	Cellular respiration.tricarboxylic acid cycle.citrate synthase	0.02	Archaeplastida
Cre12.g514750	No alias	Cellular respiration.tricarboxylic acid cycle.citrate synthase	0.1	Archaeplastida
GSVIVT01001358001	No alias	Cellular respiration.tricarboxylic acid cycle.citrate synthase	0.06	Archaeplastida
LOC_Os02g10070.2	No alias	citrate synthase	0.03	Archaeplastida
LOC_Os11g33240.1	No alias	citrate synthase	0.08	Archaeplastida
Mp8g09100.1	No alias	citrate synthase	0.08	Archaeplastida
Pp3c13_21410V3.1	No alias	Citrate synthase family protein	0.03	Archaeplastida
Solyc01g073740.4.1	No alias	citrate synthase	0.06	Archaeplastida
Zm00001e025041_P001	No alias	citrate synthase	0.02	Archaeplastida
AMTR_s00025p00238170	evm_27.TU.AmTr_v1...	Cellular respiration.tricarboxylic acid cycle.citrate synthase	0.03	LandPlants
GSVIVT01001358001	No alias	Cellular respiration.tricarboxylic acid cycle.citrate synthase	0.03	LandPlants
LOC_Os11g33240.1	No alias	citrate synthase	0.07	LandPlants
Mp8g09100.1	No alias	citrate synthase	0.08	LandPlants
Pp3c13_21410V3.1	No alias	Citrate synthase family protein	0.03	LandPlants
Pp3c1_40030V3.1	No alias	Citrate synthase family protein	0.02	LandPlants
Solyc01g073740.4.1	No alias	citrate synthase	0.05	LandPlants
AMTR_s00025p00238170	evm_27.TU.AmTr_v1...	Cellular respiration.tricarboxylic acid cycle.citrate synthase	0.03	SeedPlants
GSVIVT01001358001	No alias	Cellular respiration.tricarboxylic acid cycle.citrate synthase	0.03	SeedPlants
LOC_Os02g10070.2	No alias	citrate synthase	0.02	SeedPlants
LOC_Os11g33240.1	No alias	citrate synthase	0.07	SeedPlants
Solyc01g073740.4.1	No alias	citrate synthase	0.05	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004108	citrate (Si)-synthase activity	IDA	Interproscan
MF	GO:0004108	citrate (Si)-synthase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005739	mitochondrion	TAS	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006096	glycolytic process	RCA	Interproscan
BP	GO:0006099	tricarboxylic acid cycle	ISS	Interproscan
BP	GO:0006099	tricarboxylic acid cycle	TAS	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006165	nucleoside diphosphate phosphorylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006757	ATP generation from ADP	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IDA	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009060	aerobic respiration	RCA	Interproscan
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009132	nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009135	purine nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009185	ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0036440	citrate synthase activity	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0045333	cellular respiration	None	Extended
BP	GO:0046031	ADP metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0046686	response to cadmium ion	RCA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0046939	nucleotide phosphorylation	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002020	Citrate_synthase	78	456

External Links

No external refs found!

AT2G44350 (CSY4, ATCS)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation