Zm00001e001462_P001


Description : phytochrome photoreceptor (PHY). temperature sensor protein (PHY-B)


Gene families : OG_01_0000908 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000908_tree ,
OG_02_0000972 (LandPlants) Phylogenetic Tree(s): OG_02_0000972_tree ,
OG_03_0004471 (SeedPlants) Phylogenetic Tree(s): OG_03_0004471_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e001462_P001
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AT2G18790 HY3, OOP1, PHYB phytochrome B 0.03 Archaeplastida
AT4G16250 PHYD phytochrome D 0.03 Archaeplastida
Pp3c25_2610V3.1 No alias phytochrome B 0.02 Archaeplastida
LOC_Os03g19590.1 No alias phytochrome photoreceptor (PHY). temperature sensor... 0.02 LandPlants
Pp3c25_2610V3.1 No alias phytochrome B 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
BP GO:0009584 detection of visible light IEA Interproscan
BP GO:0018298 protein-chromophore linkage IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003018 GAF 251 432
IPR013515 Phytochrome_cen-reg 445 619
IPR013654 PAS_2 97 217
IPR003594 HATPase_C 1038 1139
IPR013767 PAS_fold 654 769
IPR013767 PAS_fold 785 904
IPR003661 HisK_dim/P 929 989
No external refs found!