AT2G43945


Description : unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59870.1); Has 292 Blast hits to 292 proteins in 84 species: Archae - 0; Bacteria - 122; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).


Gene families : OG_01_0004958 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004958_tree ,
OG_02_0004958 (LandPlants) Phylogenetic Tree(s): OG_02_0004958_tree ,
OG_03_0005972 (SeedPlants) Phylogenetic Tree(s): OG_03_0005972_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G43945
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g23680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp5g06930.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c8_21410V3.1 No alias No annotation 0.03 Archaeplastida
LOC_Os01g23680.1 No alias no hits & (original description: none) 0.03 LandPlants
Mp5g06930.1 No alias no hits & (original description: none) 0.02 LandPlants
Pp3c8_21410V3.1 No alias No annotation 0.03 LandPlants
Solyc08g015620.3.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os01g23680.1 No alias no hits & (original description: none) 0.03 SeedPlants
MA_20718g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc08g015620.3.1 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!