AT2G43560

Description : FKBP-like peptidyl-prolyl cis-trans isomerase family protein

Gene families : OG_01_0000455 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000455_tree ,
OG_02_0000843 (LandPlants) Phylogenetic Tree(s): OG_02_0000843_tree ,
OG_03_0000775 (SeedPlants) Phylogenetic Tree(s): OG_03_0000775_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G43560
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00214510	evm_27.TU.AmTr_v1...	Protein modification.protein folding and quality...	0.03	Archaeplastida
AMTR_s00032p00221170	evm_27.TU.AmTr_v1...	Protein modification.protein folding and quality...	0.05	Archaeplastida
Cpa\|evm.model.tig00020921.2	No alias	Protein modification.protein folding and quality...	0.04	Archaeplastida
Cre10.g454250	No alias	Protein modification.protein folding and quality...	0.06	Archaeplastida
Cre12.g530300	No alias	Protein modification.protein folding and quality...	0.08	Archaeplastida
Cre16.g675500	No alias	Protein modification.protein folding and quality...	0.03	Archaeplastida
Cre16.g675550	No alias	Protein modification.protein folding and quality...	0.02	Archaeplastida
GSVIVT01012171001	No alias	Protein modification.protein folding and quality...	0.14	Archaeplastida
GSVIVT01022183001	No alias	Protein modification.protein folding and quality...	0.14	Archaeplastida
GSVIVT01038097001	No alias	Protein modification.protein folding and quality...	0.17	Archaeplastida
LOC_Os02g51570.1	No alias	component PnsL4 of NDH lumen subcomplex L. protein...	0.1	Archaeplastida
LOC_Os06g45340.1	No alias	protein folding catalyst (FKBP)	0.09	Archaeplastida
LOC_Os08g42850.4	No alias	protein folding catalyst (FKBP)	0.04	Archaeplastida
MA_91136g0010	No alias	no hits & (original description: none)	0.08	Archaeplastida
MA_929563g0010	No alias	no hits & (original description: none)	0.1	Archaeplastida
Mp2g06290.1	No alias	protein folding catalyst (FKBP)	0.03	Archaeplastida
Mp6g04000.1	No alias	protein folding catalyst (FKBP)	0.19	Archaeplastida
Pp3c1_3210V3.1	No alias	FK506-binding protein 13	0.08	Archaeplastida
Pp3c4_8140V3.1	No alias	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	0.16	Archaeplastida
Smo122401	No alias	Protein modification.protein folding and quality...	0.03	Archaeplastida
Solyc04g015040.3.1	No alias	protein folding catalyst (FKBP)	0.17	Archaeplastida
Solyc04g054520.3.1	No alias	component PnsL4 of NDH lumen subcomplex L. protein...	0.18	Archaeplastida
Solyc08g006540.4.1	No alias	protein folding catalyst (FKBP)	0.13	Archaeplastida
Zm00001e003727_P001	No alias	protein folding catalyst (FKBP)	0.08	Archaeplastida
Zm00001e015866_P001	No alias	component PnsL4 of NDH lumen subcomplex L. protein...	0.15	Archaeplastida
Zm00001e037726_P001	No alias	protein folding catalyst (FKBP)	0.15	Archaeplastida
AMTR_s00010p00214510	evm_27.TU.AmTr_v1...	Protein modification.protein folding and quality...	0.03	LandPlants
AMTR_s00032p00221170	evm_27.TU.AmTr_v1...	Protein modification.protein folding and quality...	0.04	LandPlants
GSVIVT01012171001	No alias	Protein modification.protein folding and quality...	0.13	LandPlants
GSVIVT01022183001	No alias	Protein modification.protein folding and quality...	0.13	LandPlants
GSVIVT01038097001	No alias	Protein modification.protein folding and quality...	0.17	LandPlants
Gb_09047	No alias	no hits & (original description: none)	0.1	LandPlants
LOC_Os02g51570.1	No alias	component PnsL4 of NDH lumen subcomplex L. protein...	0.09	LandPlants
LOC_Os06g45340.1	No alias	protein folding catalyst (FKBP)	0.08	LandPlants
LOC_Os08g42850.4	No alias	protein folding catalyst (FKBP)	0.04	LandPlants
MA_91136g0010	No alias	no hits & (original description: none)	0.08	LandPlants
MA_929563g0010	No alias	no hits & (original description: none)	0.1	LandPlants
Mp2g06290.1	No alias	protein folding catalyst (FKBP)	0.03	LandPlants
Mp6g04000.1	No alias	protein folding catalyst (FKBP)	0.18	LandPlants
Pp3c1_3210V3.1	No alias	FK506-binding protein 13	0.07	LandPlants
Pp3c4_8140V3.1	No alias	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	0.15	LandPlants
Smo122401	No alias	Protein modification.protein folding and quality...	0.03	LandPlants
Smo48620	No alias	Protein modification.protein folding and quality...	0.02	LandPlants
Solyc04g015040.3.1	No alias	protein folding catalyst (FKBP)	0.17	LandPlants
Solyc04g054520.3.1	No alias	component PnsL4 of NDH lumen subcomplex L. protein...	0.17	LandPlants
Solyc08g006540.4.1	No alias	protein folding catalyst (FKBP)	0.11	LandPlants
Zm00001e003727_P001	No alias	protein folding catalyst (FKBP)	0.07	LandPlants
Zm00001e015866_P001	No alias	component PnsL4 of NDH lumen subcomplex L. protein...	0.16	LandPlants
Zm00001e037726_P001	No alias	protein folding catalyst (FKBP)	0.13	LandPlants
AMTR_s00010p00214510	evm_27.TU.AmTr_v1...	Protein modification.protein folding and quality...	0.03	SeedPlants
AMTR_s00032p00221170	evm_27.TU.AmTr_v1...	Protein modification.protein folding and quality...	0.04	SeedPlants
GSVIVT01012171001	No alias	Protein modification.protein folding and quality...	0.14	SeedPlants
GSVIVT01022183001	No alias	Protein modification.protein folding and quality...	0.13	SeedPlants
GSVIVT01038097001	No alias	Protein modification.protein folding and quality...	0.17	SeedPlants
Gb_09047	No alias	no hits & (original description: none)	0.09	SeedPlants
LOC_Os02g51570.1	No alias	component PnsL4 of NDH lumen subcomplex L. protein...	0.09	SeedPlants
LOC_Os06g45340.1	No alias	protein folding catalyst (FKBP)	0.08	SeedPlants
LOC_Os08g42850.4	No alias	protein folding catalyst (FKBP)	0.04	SeedPlants
MA_91136g0010	No alias	no hits & (original description: none)	0.06	SeedPlants
MA_929563g0010	No alias	no hits & (original description: none)	0.08	SeedPlants
Solyc04g015040.3.1	No alias	protein folding catalyst (FKBP)	0.17	SeedPlants
Solyc04g054520.3.1	No alias	component PnsL4 of NDH lumen subcomplex L. protein...	0.18	SeedPlants
Solyc08g006540.4.1	No alias	protein folding catalyst (FKBP)	0.11	SeedPlants
Zm00001e003727_P001	No alias	protein folding catalyst (FKBP)	0.07	SeedPlants
Zm00001e015866_P001	No alias	component PnsL4 of NDH lumen subcomplex L. protein...	0.15	SeedPlants
Zm00001e037726_P001	No alias	protein folding catalyst (FKBP)	0.12	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IBA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	ISS	Interproscan
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IBA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005527	macrolide binding	None	Extended
MF	GO:0005528	FK506 binding	ISS	Interproscan
MF	GO:0005528	FK506 binding	IBA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	RCA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009543	chloroplast thylakoid lumen	IDA	Interproscan
CC	GO:0009543	chloroplast thylakoid lumen	ISS	Interproscan
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009657	plastid organization	RCA	Interproscan
BP	GO:0009668	plastid membrane organization	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010027	thylakoid membrane organization	RCA	Interproscan
BP	GO:0010207	photosystem II assembly	RCA	Interproscan
BP	GO:0015979	photosynthesis	RCA	Interproscan
CC	GO:0016020	membrane	IBA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	IBA	Interproscan
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	RCA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	None	Extended
BP	GO:0019684	photosynthesis, light reaction	RCA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0031977	thylakoid lumen	IDA	Interproscan
CC	GO:0031978	plastid thylakoid lumen	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046490	isopentenyl diphosphate metabolic process	None	Extended
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001179	PPIase_FKBP_dom	123	212

External Links

No external refs found!

AT2G43560

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation