Zm00001e000760_P001


Description : Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana (sp|q9zvx5|pp156_arath : 505.0)


Gene families : OG_01_0015462 (Archaeplastida) Phylogenetic Tree(s): OG_01_0015462_tree ,
OG_02_0015310 (LandPlants) Phylogenetic Tree(s): OG_02_0015310_tree ,
OG_03_0015003 (SeedPlants) Phylogenetic Tree(s): OG_03_0015003_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e000760_P001
Cluster HCCA: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00075180 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g16880... 0.06 Archaeplastida
AMTR_s00041p00236190 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g63330... 0.02 Archaeplastida
LOC_Os03g10420.1 No alias Pentatricopeptide repeat-containing protein At2g16880... 0.07 Archaeplastida
AMTR_s00023p00075180 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g16880... 0.05 LandPlants
LOC_Os03g10420.1 No alias Pentatricopeptide repeat-containing protein At2g16880... 0.06 LandPlants
AMTR_s00023p00075180 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g16880... 0.02 SeedPlants
LOC_Os03g10420.1 No alias Pentatricopeptide repeat-containing protein At2g16880... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 205 236
IPR002885 Pentatricopeptide_repeat 309 341
IPR002885 Pentatricopeptide_repeat 558 606
IPR002885 Pentatricopeptide_repeat 488 536
IPR002885 Pentatricopeptide_repeat 348 397
IPR002885 Pentatricopeptide_repeat 418 467
IPR002885 Pentatricopeptide_repeat 242 291
IPR002885 Pentatricopeptide_repeat 629 676
IPR002885 Pentatricopeptide_repeat 737 782
No external refs found!