GSVIVT01038277001


Description : Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica


Gene families : OG_01_0001682 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001682_tree ,
OG_02_0007870 (LandPlants) Phylogenetic Tree(s): OG_02_0007870_tree ,
OG_03_0009675 (SeedPlants) Phylogenetic Tree(s): OG_03_0009675_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038277001
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT3G59980 No alias Nucleic acid-binding, OB-fold-like protein 0.07 Archaeplastida
Cpa|evm.model.tig00000553.11 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 Archaeplastida
Cpa|evm.model.tig00021070.69 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 Archaeplastida
Cre01.g046652 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.1 Archaeplastida
Mp1g24710.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.03 Archaeplastida
Pp3c25_15060V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.03 Archaeplastida
Solyc08g015960.3.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.1 Archaeplastida
AT3G59980 No alias Nucleic acid-binding, OB-fold-like protein 0.06 LandPlants
Mp1g24710.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.03 LandPlants
Pp3c25_15060V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.03 LandPlants
Solyc08g015960.3.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.08 LandPlants
AT3G59980 No alias Nucleic acid-binding, OB-fold-like protein 0.07 SeedPlants
Solyc08g015960.3.1 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 4 98
No external refs found!