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  5. GSVIVT01038096001

GSVIVT01038096001


Description : Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000306 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000306_tree ,
OG_02_0000732 (LandPlants) Phylogenetic Tree(s): OG_02_0000732_tree ,
OG_03_0001882 (SeedPlants) Phylogenetic Tree(s): OG_03_0001882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01038096001
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00175980 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g48730,... 0.04 Archaeplastida
AT3G53170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Archaeplastida
Cpa|evm.model.tig00001623.10 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.01 Archaeplastida
GSVIVT01032162001 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.05 Archaeplastida
LOC_Os02g51480.1 No alias Pentatricopeptide repeat-containing protein PPR5... 0.04 Archaeplastida
LOC_Os03g02430.1 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.04 Archaeplastida
LOC_Os03g19650.3 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.04 Archaeplastida
LOC_Os06g07550.1 No alias Pentatricopeptide repeat-containing protein At5g48730,... 0.03 Archaeplastida
MA_793801g0010 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.04 Archaeplastida
Mp1g15120.1 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.04 Archaeplastida
Pp3c4_14490V3.1 No alias plastid transcriptionally active 2 0.04 Archaeplastida
Pp3c8_13830V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Smo119487 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.06 Archaeplastida
Solyc12g098990.2.1 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.03 Archaeplastida
Zm00001e023883_P001 No alias Pentatricopeptide repeat-containing protein PPR5,... 0.05 Archaeplastida
Zm00001e025825_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032726_P001 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.03 Archaeplastida
Mp1g15120.1 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.04 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 152 199
IPR002885 Pentatricopeptide_repeat 121 150
No external refs found!