GSVIVT01037861001


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component


Gene families : OG_01_0001266 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001266_tree ,
OG_02_0000955 (LandPlants) Phylogenetic Tree(s): OG_02_0000955_tree ,
OG_03_0003891 (SeedPlants) Phylogenetic Tree(s): OG_03_0003891_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037861001
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT4G33890 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 Archaeplastida
LOC_Os04g56300.1 No alias component ADA1 of SAGA transcription co-activator complex 0.04 Archaeplastida
Pp3c3_34380V3.1 No alias No annotation 0.04 Archaeplastida
Solyc03g117820.1.1 No alias component ADA1 of SAGA transcription co-activator complex 0.03 Archaeplastida
Solyc06g068610.3.1 No alias component ADA1 of SAGA transcription co-activator complex 0.04 Archaeplastida
Zm00001e006681_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.03 Archaeplastida
Zm00001e041823_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.04 Archaeplastida
AT4G33890 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 LandPlants
LOC_Os04g56300.1 No alias component ADA1 of SAGA transcription co-activator complex 0.04 LandPlants
Pp3c3_34380V3.1 No alias No annotation 0.03 LandPlants
Solyc03g117820.1.1 No alias component ADA1 of SAGA transcription co-activator complex 0.03 LandPlants
Solyc06g068610.3.1 No alias component ADA1 of SAGA transcription co-activator complex 0.04 LandPlants
Zm00001e006681_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.03 LandPlants
Zm00001e041823_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.04 LandPlants
AT2G14850 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 SeedPlants
AT4G33890 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 SeedPlants

Type GO Term Name Evidence Source
CC GO:0070461 SAGA-type complex IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 117 222
IPR024738 Hfi1/Tada1 7 84
No external refs found!