AT2G41720 (EMB2654)


Aliases : EMB2654

Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007624 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007624_tree ,
OG_02_0006946 (LandPlants) Phylogenetic Tree(s): OG_02_0006946_tree ,
OG_03_0006926 (SeedPlants) Phylogenetic Tree(s): OG_03_0006926_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G41720
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00159p00058480 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g41720... 0.03 Archaeplastida
Gb_07283 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.1 Archaeplastida
LOC_Os07g11280.2 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.05 Archaeplastida
Solyc04g015950.3.1 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.06 Archaeplastida
AMTR_s00159p00058480 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g41720... 0.03 LandPlants
Gb_07283 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.09 LandPlants
LOC_Os07g11280.2 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.05 LandPlants
Pp3c2_1940V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
Solyc04g015950.3.1 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.06 LandPlants
AMTR_s00159p00058480 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g41720... 0.03 SeedPlants
Gb_07283 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.09 SeedPlants
LOC_Os07g11280.2 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.05 SeedPlants
Solyc04g015950.3.1 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.06 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009793 embryo development ending in seed dormancy NAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 285 312
IPR002885 Pentatricopeptide_repeat 622 667
IPR002885 Pentatricopeptide_repeat 376 438
IPR002885 Pentatricopeptide_repeat 447 482
IPR002885 Pentatricopeptide_repeat 728 783
IPR002885 Pentatricopeptide_repeat 313 365
IPR002885 Pentatricopeptide_repeat 494 542
IPR002885 Pentatricopeptide_repeat 211 258
IPR002885 Pentatricopeptide_repeat 567 610
IPR002885 Pentatricopeptide_repeat 145 188
No external refs found!