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  5. GSVIVT01037216001

GSVIVT01037216001


Description : Cell wall.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase


Gene families : OG_01_0000315 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000315_tree ,
OG_02_0000179 (LandPlants) Phylogenetic Tree(s): OG_02_0000179_tree ,
OG_03_0001045 (SeedPlants) Phylogenetic Tree(s): OG_03_0001045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01037216001
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT3G30540 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
LOC_Os02g52800.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_111906g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Mp8g06310.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Mp8g13380.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_08848 No alias endo-beta-1,4-mannanase 0.02 LandPlants
Gb_30579 No alias endo-beta-1,4-mannanase 0.01 LandPlants
MA_10432193g0010 No alias endo-beta-1,4-mannanase 0.01 LandPlants
MA_10433157g0010 No alias no hits & (original description: none) 0.01 LandPlants
MA_6558g0010 No alias endo-beta-1,4-mannanase 0.01 LandPlants
Mp8g06310.1 No alias endo-beta-1,4-mannanase 0.04 LandPlants
MA_10432193g0010 No alias endo-beta-1,4-mannanase 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 106 378
No external refs found!