GSVIVT01036698001

Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin

Gene families : OG_01_0003427 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003427_tree ,
OG_02_0004010 (LandPlants) Phylogenetic Tree(s): OG_02_0004010_tree ,
OG_03_0005364 (SeedPlants) Phylogenetic Tree(s): OG_03_0005364_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01036698001
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00124730	evm_27.TU.AmTr_v1...	Protein translocation.nucleus.nucleocytoplasmic...	0.03	Archaeplastida
AT1G79280	NUA, AtTPR	nuclear pore anchor	0.13	Archaeplastida
Cpa\|evm.model.tig00000404.46	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.06	Archaeplastida
Gb_36757	No alias	NUA nucleoporin of nuclear pore complex	0.12	Archaeplastida
LOC_Os02g50790.2	No alias	no hits & (original description: none)	0.06	Archaeplastida
LOC_Os02g50799.1	No alias	NUA nucleoporin of nuclear pore complex	0.06	Archaeplastida
MA_10287420g0010	No alias	no hits & (original description: none)	0.07	Archaeplastida
MA_10435343g0040	No alias	NUA nucleoporin of nuclear pore complex	0.11	Archaeplastida
MA_109011g0010	No alias	NUA nucleoporin of nuclear pore complex	0.1	Archaeplastida
MA_113769g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_125713g0010	No alias	no hits & (original description: none)	0.11	Archaeplastida
MA_33097g0010	No alias	Nuclear-pore anchor OS=Arabidopsis thaliana...	0.17	Archaeplastida
MA_929786g0010	No alias	NUA nucleoporin of nuclear pore complex	0.07	Archaeplastida
Mp2g14600.1	No alias	NUA nucleoporin of nuclear pore complex	0.11	Archaeplastida
Pp3c8_8020V3.1	No alias	nuclear pore anchor	0.16	Archaeplastida
Smo444132	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.1	Archaeplastida
Solyc06g053570.2.1	No alias	NUA nucleoporin of nuclear pore complex	0.13	Archaeplastida
Solyc06g053590.4.1	No alias	No annotation	0.1	Archaeplastida
Zm00001e023916_P004	No alias	NUA nucleoporin of nuclear pore complex	0.16	Archaeplastida
AMTR_s00077p00124730	evm_27.TU.AmTr_v1...	Protein translocation.nucleus.nucleocytoplasmic...	0.03	LandPlants
AT1G79280	NUA, AtTPR	nuclear pore anchor	0.1	LandPlants
Gb_36757	No alias	NUA nucleoporin of nuclear pore complex	0.1	LandPlants
LOC_Os02g50799.1	No alias	NUA nucleoporin of nuclear pore complex	0.06	LandPlants
MA_10435343g0040	No alias	NUA nucleoporin of nuclear pore complex	0.08	LandPlants
MA_109011g0010	No alias	NUA nucleoporin of nuclear pore complex	0.08	LandPlants
MA_125713g0010	No alias	no hits & (original description: none)	0.12	LandPlants
MA_33097g0010	No alias	Nuclear-pore anchor OS=Arabidopsis thaliana...	0.14	LandPlants
Mp2g14600.1	No alias	NUA nucleoporin of nuclear pore complex	0.09	LandPlants
Pp3c8_8020V3.1	No alias	nuclear pore anchor	0.14	LandPlants
Smo444132	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.09	LandPlants
Solyc06g053570.2.1	No alias	NUA nucleoporin of nuclear pore complex	0.1	LandPlants
Zm00001e023916_P004	No alias	NUA nucleoporin of nuclear pore complex	0.15	LandPlants
AMTR_s00077p00124730	evm_27.TU.AmTr_v1...	Protein translocation.nucleus.nucleocytoplasmic...	0.03	SeedPlants
AT1G79280	NUA, AtTPR	nuclear pore anchor	0.1	SeedPlants
Gb_36757	No alias	NUA nucleoporin of nuclear pore complex	0.09	SeedPlants
LOC_Os02g50799.1	No alias	NUA nucleoporin of nuclear pore complex	0.06	SeedPlants
MA_10435343g0040	No alias	NUA nucleoporin of nuclear pore complex	0.08	SeedPlants
MA_125713g0010	No alias	no hits & (original description: none)	0.12	SeedPlants
MA_33097g0010	No alias	Nuclear-pore anchor OS=Arabidopsis thaliana...	0.14	SeedPlants
Solyc06g053570.2.1	No alias	NUA nucleoporin of nuclear pore complex	0.1	SeedPlants
Zm00001e023916_P004	No alias	NUA nucleoporin of nuclear pore complex	0.15	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0006606	protein import into nucleus	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0017038	protein import	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012929	TPR/MLP1	1046	1173

External Links

No external refs found!

GSVIVT01036698001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation