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AT2G41410


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0000031 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000031_tree ,
OG_02_0013975 (LandPlants) Phylogenetic Tree(s): OG_02_0013975_tree ,
OG_03_0000352 (SeedPlants) Phylogenetic Tree(s): OG_03_0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G41410
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00127800 evm_27.TU.AmTr_v1... Calmodulin OS=Solanum lycopersicum 0.03 Archaeplastida
AT3G29000 No alias Calcium-binding EF-hand family protein 0.02 Archaeplastida
GSVIVT01011435001 No alias Probable calcium-binding protein CML45 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_03898 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.04 Archaeplastida
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_30819 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_35180 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.05 Archaeplastida
Gb_37024 No alias Calmodulin OS=Solanum lycopersicum (sp|p27161|calm_sollc : 286.0) 0.03 Archaeplastida
LOC_Os01g04330.1 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os01g72080.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g24780.1 No alias Probable calcium-binding protein CML21 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os07g48780.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
LOC_Os09g24580.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g04560.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.04 Archaeplastida
MA_158316g0010 No alias Probable calcium-binding protein CML13 OS=Oryza sativa... 0.03 Archaeplastida
MA_7799814g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g20440.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.04 Archaeplastida
Pp3c17_17270V3.1 No alias centrin2 0.03 Archaeplastida
Smo83841 No alias Calmodulin-5/6/7/8 OS=Solanum tuberosum 0.02 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.07 Archaeplastida
Solyc04g018110.1.1 No alias Probable calcium-binding protein CML35 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g074740.2.1 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.06 Archaeplastida
Solyc10g079420.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.04 Archaeplastida
Solyc10g079420.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.03 LandPlants
Gb_03898 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.04 SeedPlants
LOC_Os01g04330.1 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.03 SeedPlants
LOC_Os01g72080.1 No alias no hits & (original description: none) 0.01 SeedPlants
LOC_Os11g04560.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 SeedPlants
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 144 207
IPR002048 EF_hand_dom 71 129
No external refs found!