GSVIVT01035975001


Description : Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0008852 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008852_tree ,
OG_02_0008546 (LandPlants) Phylogenetic Tree(s): OG_02_0008546_tree ,
OG_03_0005697 (SeedPlants) Phylogenetic Tree(s): OG_03_0005697_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035975001
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00039970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g31850,... 0.04 Archaeplastida
AT4G31850 PGR3 proton gradient regulation 3 0.15 Archaeplastida
Gb_22724 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 Archaeplastida
Gb_33624 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 Archaeplastida
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 Archaeplastida
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.15 Archaeplastida
Zm00001e038060_P001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 Archaeplastida
AMTR_s00019p00039970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g31850,... 0.04 LandPlants
AT4G31850 PGR3 proton gradient regulation 3 0.12 LandPlants
Gb_22724 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 LandPlants
Gb_33624 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 LandPlants
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.05 LandPlants
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.12 LandPlants
Zm00001e038060_P001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 LandPlants
AMTR_s00019p00039970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g31850,... 0.04 SeedPlants
AT4G31850 PGR3 proton gradient regulation 3 0.12 SeedPlants
Gb_22724 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 SeedPlants
Gb_33624 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 SeedPlants
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.05 SeedPlants
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.12 SeedPlants
Zm00001e038060_P001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 790 819
IPR002885 Pentatricopeptide_repeat 546 572
IPR002885 Pentatricopeptide_repeat 263 293
IPR002885 Pentatricopeptide_repeat 895 924
IPR002885 Pentatricopeptide_repeat 641 674
IPR002885 Pentatricopeptide_repeat 502 534
IPR002885 Pentatricopeptide_repeat 821 870
IPR002885 Pentatricopeptide_repeat 295 342
IPR002885 Pentatricopeptide_repeat 931 974
IPR002885 Pentatricopeptide_repeat 575 624
IPR002885 Pentatricopeptide_repeat 365 413
IPR002885 Pentatricopeptide_repeat 996 1040
IPR002885 Pentatricopeptide_repeat 1066 1106
IPR002885 Pentatricopeptide_repeat 424 477
IPR002885 Pentatricopeptide_repeat 180 240
No external refs found!