AT2G40810 (ATG18C, ATATG18C)


Aliases : ATG18C, ATATG18C

Description : homolog of yeast autophagy 18C


Gene families : OG_01_0001600 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001600_tree ,
OG_02_0001405 (LandPlants) Phylogenetic Tree(s): OG_02_0001405_tree ,
OG_03_0001795 (SeedPlants) Phylogenetic Tree(s): OG_03_0001795_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G40810
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010943001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida
LOC_Os01g70780.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
MA_29107g0020 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 Archaeplastida
Mp1g05420.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
GSVIVT01010943001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 LandPlants
GSVIVT01031120001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 LandPlants
LOC_Os01g70780.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 LandPlants
MA_29107g0020 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 LandPlants
Mp1g05420.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 LandPlants
Smo171378 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 LandPlants
Solyc01g099400.4.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 LandPlants
Solyc06g048510.4.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 LandPlants
GSVIVT01010943001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 SeedPlants
GSVIVT01031120001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 SeedPlants
LOC_Os01g70780.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants
MA_29107g0020 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 SeedPlants
Solyc06g048510.4.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006914 autophagy IBA Interproscan
CC GO:0031090 organelle membrane IBA Interproscan
BP GO:0042594 response to starvation IBA Interproscan
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IBA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 248 273
No external refs found!