GSVIVT01035672001


Description : Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana


Gene families : OG_01_0009354 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009354_tree ,
OG_02_0007114 (LandPlants) Phylogenetic Tree(s): OG_02_0007114_tree ,
OG_03_0006861 (SeedPlants) Phylogenetic Tree(s): OG_03_0006861_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035672001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.04 Archaeplastida
AT5G25630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 Archaeplastida
Smo21211 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.02 Archaeplastida
Solyc07g032380.4.1 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 Archaeplastida
Solyc08g068230.4.1 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.1 Archaeplastida
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.02 LandPlants
AT5G21222 No alias protein kinase family protein 0.04 LandPlants
AT5G25630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 LandPlants
Gb_09464 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.02 LandPlants
Pp3c16_9240V3.1 No alias protein kinase family protein 0.03 LandPlants
Solyc08g068230.4.1 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.09 LandPlants
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.02 SeedPlants
AT5G21222 No alias protein kinase family protein 0.04 SeedPlants
AT5G25630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 SeedPlants
Gb_09464 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.02 SeedPlants
Solyc08g068230.4.1 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.09 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 309 363
IPR002885 Pentatricopeptide_repeat 140 187
IPR002885 Pentatricopeptide_repeat 421 468
IPR002885 Pentatricopeptide_repeat 246 295
IPR002885 Pentatricopeptide_repeat 390 419
IPR002885 Pentatricopeptide_repeat 215 244
No external refs found!