1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01035205001

GSVIVT01035205001


Description : Auxin response factor 12 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree ,
OG_02_0009308 (LandPlants) Phylogenetic Tree(s): OG_02_0009308_tree ,
OG_03_0012392 (SeedPlants) Phylogenetic Tree(s): OG_03_0012392_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035205001
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00157690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
GSVIVT01025691001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
Gb_31132 No alias transcription factor (ARF) 0.03 Archaeplastida
Gb_39686 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os04g56850.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os06g48950.1 No alias transcription factor (ARF) 0.03 Archaeplastida
MA_122218g0010 No alias transcription factor (ARF) 0.04 Archaeplastida
Mp1g12750.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Mp2g02890.1 No alias Auxin response factor 19 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Pp3c13_4720V3.1 No alias auxin response factor 6 0.02 Archaeplastida
Pp3c26_11550V3.1 No alias auxin response factor 6 0.04 Archaeplastida
Solyc02g037530.3.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Solyc09g007810.4.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Solyc11g069190.2.1 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e003229_P002 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e006577_P003 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e018126_P002 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e030325_P003 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e032423_P002 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e041910_P003 No alias transcription factor (ARF) 0.03 Archaeplastida
Gb_39686 No alias transcription factor (ARF) 0.04 LandPlants
MA_85955g0010 No alias transcription factor (ARF) 0.03 LandPlants
Mp2g02890.1 No alias Auxin response factor 19 OS=Oryza sativa subsp. japonica... 0.03 LandPlants
Pp3c9_21330V3.1 No alias auxin response factor 6 0.03 LandPlants
Gb_39686 No alias transcription factor (ARF) 0.03 SeedPlants
MA_55076g0010 No alias transcription factor (ARF) 0.02 SeedPlants
Solyc07g043610.3.1 No alias transcription factor (ARF) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 33 121
No external refs found!