AT2G40240


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0001265 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001265_tree ,
OG_02_0000728 (LandPlants) Phylogenetic Tree(s): OG_02_0000728_tree ,
OG_03_0001775 (SeedPlants) Phylogenetic Tree(s): OG_03_0001775_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G40240
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00098210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g13040,... 0.03 Archaeplastida
LOC_Os07g48850.2 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.02 Archaeplastida
MA_101446g0010 No alias Pentatricopeptide repeat-containing protein At1g71060,... 0.03 Archaeplastida
Smo80491 No alias Pentatricopeptide repeat-containing protein At1g62670,... 0.04 Archaeplastida
Solyc03g095960.1.1 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.03 Archaeplastida
Zm00001e035905_P001 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.03 Archaeplastida
AMTR_s00131p00098210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g13040,... 0.03 LandPlants
AMTR_s00144p00054940 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g40240,... 0.02 LandPlants
AMTR_s00153p00079500 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g56030,... 0.02 LandPlants
MA_101446g0010 No alias Pentatricopeptide repeat-containing protein At1g71060,... 0.03 LandPlants
Solyc06g008190.1.1 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.03 LandPlants
Zm00001e035905_P001 No alias Pentatricopeptide repeat-containing protein At1g13040,... 0.03 LandPlants
AMTR_s00144p00054940 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g40240,... 0.02 SeedPlants
AMTR_s00153p00079500 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g56030,... 0.02 SeedPlants
MA_101446g0010 No alias Pentatricopeptide repeat-containing protein At1g71060,... 0.03 SeedPlants
MA_18233g0020 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.01 SeedPlants
Solyc03g095960.1.1 No alias Pentatricopeptide repeat-containing protein At2g40240,... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 110 133
IPR002885 Pentatricopeptide_repeat 179 207
IPR002885 Pentatricopeptide_repeat 291 313
IPR002885 Pentatricopeptide_repeat 209 239
No external refs found!